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Os06g0103700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutamine cyclotransferase precursor (EC 2.3.2.5).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.013) R2 : 0.0237
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0911 (0.0273) R2dN8 : 0.0307 R2N8 : 0.0237
σ : 0.245
deviance : 27.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.87 0.187 9.99 -0.386 0.328 -0.312 0.178 0.191 0.0301 4.44 27.96 23 -- --
15.99 0.186 9.99 -0.385 0.337 -0.332 0.3 -- 0.0308 4.11 27.1 22 -- --
15.94 0.186 9.99 -0.384 0.328 -0.313 -- 0.237 0.03 4.45 28.13 22 -- --
16.21 0.188 9.99 -0.393 0.325 -0.299 -- -- 0.0299 4.62 28.49 22 -- --
20.73 0.212 9.99 -0.372 -- -0.194 -- 0.254 0.0446 -- 26.73 16 -- --
17.73 0.197 9.98 -0.379 0.33 -- -0.105 -- 0.0446 7.91 -- -- -- --
17.77 0.197 9.98 -0.382 0.33 -- -- -- 0.0446 7.85 -- -- -- --
20.97 0.213 9.99 -0.379 -- -0.189 -- -- 0.0495 -- 24.83 9 -- --
20.29 0.21 9.98 -- 0.314 -0.277 -- -- 0.0716 4.96 30 30 -- --
23.68 0.227 9.99 -0.378 -- -- -- -- 0.0491 -- -- -- -- --
21.61 0.217 9.97 -- 0.328 -- -- -- 0.0871 7.94 -- -- -- --
24.62 0.231 9.98 -- -- -0.177 -- -- 0.0898 -- 14.93 7 -- --
27.46 0.245 9.98 -- -- -- -- -- 0.0911 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.31 temperature 10.0 10 > th dose dependent rect. 6 10
9 14.74 temperature 10.0 270 > th dose dependent rect. 4 10
12 14.77 temperature 15.0 10 > th dose dependent rect. 21 19
13 14.80 temperature 15.0 270 > th dose dependent rect. 19 5
14 14.81 temperature 15.0 270 > th dose independent rect. 4 10
18 14.83 temperature 10.0 270 > th dose dependent rect. 19 18
27 14.92 temperature 20.0 10 > th dose independent rect. 6 10
30 14.95 wind 7.0 270 < th dose independent rect. 4 10
37 14.98 temperature 25.0 30 > th dose independent rect. 4 12
39 14.99 precipitation 0.1 270 < th dose independent rect. 14 14
40 14.99 precipitation 0.1 270 < th dose dependent rect. 14 14
49 15.03 temperature 20.0 270 > th dose independent rect. 18 6
70 15.11 temperature 15.0 10 > th dose dependent rect. 20 6
71 15.11 temperature 10.0 270 > th dose dependent rect. 19 16
72 15.12 wind 9.0 270 < th dose independent rect. 14 14
73 15.12 atmosphere 1000.0 10 > th dose independent rect. 16 14
76 15.13 humidity 80.0 14400 > th dose independent rect. 5 1
86 15.15 atmosphere 995.0 270 > th dose independent rect. 4 10
87 15.15 atmosphere 1015.0 270 < th dose independent rect. 4 10
88 15.15 temperature 10.0 270 > th dose independent rect. 14 14
90 15.15 temperature 25.0 30 > th dose independent rect. 21 19
95 15.15 temperature 10.0 270 > th dose dependent rect. 19 14
103 15.17 precipitation 0.1 270 < th dose independent rect. 4 10
105 15.17 precipitation 0.1 270 < th dose dependent rect. 4 10
106 15.18 humidity 80.0 14400 < th dose independent rect. 4 3
108 15.18 temperature 10.0 10 > th dose dependent rect. 21 17
111 15.19 wind 3.0 14400 < th dose independent rect. 2 2
113 15.19 humidity 80.0 14400 < th dose dependent rect. 5 2
126 15.21 humidity 80.0 14400 < th dose independent rect. 4 1
130 15.21 wind 1.0 270 > th dose independent rect. 14 14
139 15.22 atmosphere 995.0 270 > th dose independent rect. 14 14
148 15.23 wind 3.0 14400 > th dose independent rect. 2 2
151 15.23 atmosphere 1015.0 270 < th dose independent rect. 19 4
153 15.23 atmosphere 1015.0 270 < th dose independent rect. 18 6
159 15.24 wind 7.0 10 < th dose independent rect. 6 10
160 15.24 radiation 40.0 270 < th dose independent rect. 14 14
186 15.27 humidity 50.0 270 > th dose independent rect. 4 10
211 15.29 temperature 20.0 270 > th dose dependent rect. 21 1
221 15.30 temperature 15.0 30 > th dose dependent rect. 21 3
235 15.31 humidity 90.0 10 < th dose independent rect. 4 12
236 15.31 precipitation 0.1 270 < th dose independent rect. 23 20
239 15.31 precipitation 0.1 270 < th dose dependent rect. 23 20
245 15.32 temperature 15.0 270 > th dose independent rect. 17 22
273 15.34 humidity 60.0 720 > th dose independent rect. 17 7
281 15.34 temperature 15.0 270 > th dose independent rect. 18 20
293 15.35 wind 9.0 270 < th dose dependent rect. 5 9
300 15.36 atmosphere 995.0 270 > th dose independent rect. 24 18
308 15.37 wind 9.0 14400 < th dose independent rect. 12 1
310 15.37 wind 1.0 270 > th dose independent rect. 19 4
312 15.37 precipitation 0.1 270 < th dose independent rect. 24 18
317 15.37 precipitation 0.1 270 < th dose dependent rect. 24 18
337 15.39 temperature 30.0 270 < th dose independent rect. 18 6
339 15.39 wind 7.0 14400 > th dose dependent rect. 12 1
349 15.40 humidity 90.0 90 < th dose independent rect. 6 9
350 15.40 temperature 20.0 270 > th dose independent rect. 19 18
352 15.40 atmosphere 995.0 270 > th dose independent rect. 23 20
356 15.40 radiation 1.0 270 < th dose dependent rect. 18 6
368 15.41 humidity 90.0 90 < th dose independent rect. 4 11
369 15.41 wind 9.0 10 < th dose independent rect. 16 14
370 15.41 precipitation 0.1 10 < th dose independent rect. 16 14
371 15.41 humidity 80.0 14400 < th dose dependent rect. 2 1
375 15.41 humidity 50.0 270 > th dose dependent rect. 18 6
376 15.41 precipitation 0.1 10 < th dose dependent rect. 16 14
378 15.41 temperature 10.0 10 > th dose dependent rect. 6 18
385 15.42 radiation 1.0 270 < th dose independent rect. 18 6
399 15.43 radiation 1.0 10 > th dose independent rect. 6 10
402 15.43 wind 1.0 270 > th dose independent rect. 23 20
416 15.44 temperature 10.0 10 > th dose independent rect. 6 10
418 15.44 atmosphere 1015.0 10 < th dose independent rect. 6 10
419 15.44 temperature 10.0 10 > th dose independent rect. 16 14
420 15.44 radiation 20.0 10 < th dose independent rect. 16 14
438 15.45 radiation 20.0 270 < th dose independent rect. 18 6
443 15.45 precipitation 0.1 10 < th dose independent rect. 6 10
444 15.45 temperature 10.0 270 > th dose independent rect. 24 18
445 15.45 atmosphere 1015.0 270 < th dose independent rect. 24 18
454 15.45 precipitation 0.1 10 < th dose dependent rect. 6 10
458 15.45 radiation 40.0 30 < th dose dependent rect. 24 21
464 15.46 wind 9.0 270 < th dose independent rect. 18 6
486 15.47 temperature 30.0 270 < th dose independent rect. 19 4
487 15.47 humidity 50.0 270 > th dose independent rect. 19 4
489 15.47 atmosphere 995.0 270 > th dose independent rect. 19 4
490 15.47 radiation 1.0 270 < th dose independent rect. 19 4
498 15.47 wind 9.0 270 < th dose independent rect. 24 18
499 15.47 temperature 25.0 30 < th dose independent rect. 2 18
502 15.47 temperature 10.0 270 > th dose independent rect. 23 20
506 15.47 humidity 50.0 270 > th dose dependent rect. 19 4
507 15.47 radiation 1.0 270 < th dose dependent rect. 19 4
521 15.48 wind 9.0 270 < th dose independent rect. 19 4
537 15.48 temperature 30.0 10 < th dose dependent rect. 2 18
540 15.49 atmosphere 995.0 270 > th dose independent rect. 18 6
545 15.49 wind 9.0 270 < th dose independent rect. 23 20
556 15.49 radiation 1.0 270 < th dose dependent rect. 5 19
563 15.50 temperature 20.0 270 > th dose independent rect. 5 19
596 15.51 temperature 10.0 10 > th dose dependent rect. 6 20
597 15.51 temperature 30.0 10 < th dose dependent rect. 24 20
606 15.52 humidity 80.0 30 < th dose independent rect. 21 19
609 15.52 atmosphere 1015.0 270 < th dose independent rect. 18 20
620 15.52 radiation 40.0 10 < th dose dependent rect. 16 14
637 15.53 atmosphere 995.0 10 > th dose independent rect. 6 10
645 15.54 atmosphere 995.0 270 > th dose independent rect. 15 2
649 15.54 atmosphere 995.0 270 > th dose independent rect. 14 4
699 15.55 wind 1.0 270 > th dose independent rect. 13 6
709 15.55 wind 7.0 90 < th dose independent rect. 20 19
714 15.55 radiation 20.0 14400 < th dose dependent rect. 21 6
716 15.55 radiation 40.0 10 < th dose dependent rect. 10 10
721 15.56 wind 7.0 270 < th dose independent rect. 14 4
725 15.56 atmosphere 1015.0 270 < th dose independent rect. 19 18
734 15.56 radiation 40.0 30 < th dose dependent rect. 2 18
748 15.57 radiation 20.0 30 < th dose independent rect. 24 21
749 15.57 temperature 15.0 10 > th dose dependent sin 4 NA
757 15.58 wind 7.0 270 < th dose independent rect. 15 2
758 15.58 radiation 30.0 270 < th dose independent rect. 15 2
761 15.58 precipitation 0.1 270 < th dose independent rect. 19 4
762 15.58 temperature 20.0 10 > th dose independent rect. 20 6
769 15.58 radiation 1.0 270 > th dose independent rect. 5 9
779 15.58 temperature 25.0 30 < th dose independent rect. 2 16
788 15.58 wind 7.0 270 < th dose independent rect. 18 20
790 15.58 humidity 50.0 270 > th dose independent rect. 18 20
791 15.58 wind 9.0 270 < th dose independent rect. 17 22
795 15.58 radiation 10.0 14400 < th dose dependent rect. 22 3
796 15.58 precipitation 0.1 270 < th dose dependent rect. 19 4
809 15.59 precipitation 0.1 270 < th dose independent rect. 15 2
813 15.59 atmosphere 1015.0 10 < th dose independent rect. 20 6
827 15.59 wind 9.0 270 < th dose dependent rect. 15 2
828 15.59 precipitation 0.1 270 < th dose dependent rect. 15 2
841 15.59 humidity 90.0 10 < th dose dependent rect. 21 19
889 15.61 wind 7.0 14400 > th dose independent rect. 12 1
891 15.61 temperature 10.0 270 > th dose independent rect. 15 2
893 15.61 atmosphere 1010.0 270 < th dose independent rect. 15 2
897 15.61 wind 1.0 270 > th dose independent rect. 14 4
904 15.61 precipitation 0.1 270 < th dose independent rect. 18 6
916 15.61 precipitation 0.1 10 < th dose independent rect. 2 18
929 15.61 precipitation 0.1 270 < th dose dependent rect. 18 6
938 15.61 precipitation 0.1 10 < th dose dependent rect. 2 18
941 15.62 temperature 25.0 30 > th dose independent sin 4 NA
943 15.62 atmosphere 1015.0 30 < th dose independent rect. 21 3
951 15.62 atmosphere 995.0 270 > th dose independent rect. 13 6
954 15.62 wind 9.0 14400 < th dose independent rect. 4 9
965 15.62 radiation 40.0 90 < th dose independent rect. 2 17
991 15.62 radiation 40.0 10 < th dose dependent rect. 14 16