Os05g0595500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pleckstrin homology-type domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0595500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Pleckstrin homology-type domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.73 | 0.277 | 11.7 | 0.2 | 0.391 | -0.396 | -0.0689 | -0.497 | 0.22 | 9.87 | 10.83 | 8 | -- | -- |
| 35.08 | 0.276 | 11.7 | 0.189 | 0.381 | -0.373 | -0.287 | -- | 0.219 | 9.82 | 10.95 | 8 | -- | -- |
| 34.74 | 0.275 | 11.7 | 0.199 | 0.394 | -0.4 | -- | -0.551 | 0.221 | 9.9 | 10.56 | 7 | -- | -- |
| 35.36 | 0.277 | 11.7 | 0.181 | 0.393 | -0.387 | -- | -- | 0.219 | 9.86 | 8.738 | 5 | -- | -- |
| 40.57 | 0.298 | 11.7 | 0.186 | -- | -0.247 | -- | -0.748 | 0.222 | -- | 32.93 | 4 | -- | -- |
| 37.48 | 0.287 | 11.7 | 0.186 | 0.274 | -- | -0.32 | -- | 0.221 | 8.48 | -- | -- | -- | -- |
| 37.8 | 0.288 | 11.7 | 0.176 | 0.275 | -- | -- | -- | 0.221 | 8.39 | -- | -- | -- | -- |
| 41.24 | 0.3 | 11.7 | 0.174 | -- | -0.207 | -- | -- | 0.22 | -- | 30.33 | 4 | -- | -- |
| 36.24 | 0.28 | 11.7 | -- | 0.394 | -0.381 | -- | -- | 0.195 | 9.89 | 7.878 | 7 | -- | -- |
| 42.01 | 0.303 | 11.7 | 0.177 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 38.61 | 0.291 | 11.7 | -- | 0.276 | -- | -- | -- | 0.201 | 8.35 | -- | -- | -- | -- |
| 42.04 | 0.303 | 11.7 | -- | -- | -0.217 | -- | -- | 0.201 | -- | 32.41 | 4 | -- | -- |
| 42.83 | 0.305 | 11.7 | -- | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 4 | 31.17 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 8 | 31.17 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 18 | 31.17 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 19 | 31.17 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 39 | 31.17 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 42 | 31.17 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 47 | 31.27 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 48 | 31.27 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 51 | 31.36 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 55 | 31.47 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 58 | 31.58 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 60 | 31.63 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 61 | 31.71 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 62 | 31.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 64 | 31.74 | wind | 7.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 72 | 31.77 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 73 | 31.77 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 78 | 31.77 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 83 | 31.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 84 | 31.77 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 85 | 31.77 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 90 | 31.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 92 | 31.79 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 95 | 31.93 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 99 | 32.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 100 | 32.15 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 111 | 32.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 112 | 32.68 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 128 | 33.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 131 | 33.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 135 | 33.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 163 | 33.54 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 168 | 33.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 174 | 33.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 179 | 33.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 184 | 33.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 209 | 33.97 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 224 | 34.08 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 231 | 34.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 234 | 34.16 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 236 | 34.16 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 244 | 34.19 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 23 |
| 247 | 34.19 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 254 | 34.21 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 267 | 34.23 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 317 | 34.28 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 321 | 34.28 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 348 | 34.30 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 461 | 34.35 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 524 | 34.37 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 574 | 34.38 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 575 | 34.38 | temperature | 20.0 | 14400 | > th | dose dependent | no | NA | NA |
| 577 | 34.38 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 604 | 34.38 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 643 | 34.40 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 645 | 34.40 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 15 |
| 688 | 34.41 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 692 | 34.41 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 705 | 34.41 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 742 | 34.42 | temperature | 25.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 745 | 34.42 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 855 | 34.44 | temperature | 25.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 862 | 34.44 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 885 | 34.44 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 896 | 34.44 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 12 | 9 |
| 946 | 34.45 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 948 | 34.45 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 9 |