Os05g0593200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0593200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.88 | 0.22 | 11 | -0.241 | 0.148 | -0.409 | 0.265 | 0.735 | -0.16 | 7 | 90.33 | 55 | -- | -- |
| 22.83 | 0.223 | 11 | -0.21 | 0.165 | -0.393 | 0.466 | -- | -0.155 | 5.77 | 89.42 | 53 | -- | -- |
| 22.04 | 0.219 | 11 | -0.238 | 0.151 | -0.415 | -- | 0.78 | -0.164 | 6.66 | 90.38 | 57 | -- | -- |
| 23.33 | 0.225 | 11 | -0.222 | 0.157 | -0.356 | -- | -- | -0.155 | 6.23 | 89.02 | 53 | -- | -- |
| 23.03 | 0.224 | 11 | -0.243 | -- | -0.351 | -- | 0.831 | -0.146 | -- | 90.65 | 56 | -- | -- |
| 26.58 | 0.242 | 11 | -0.255 | 0.118 | -- | 0.0484 | -- | -0.0803 | 11.5 | -- | -- | -- | -- |
| 26.59 | 0.241 | 11 | -0.253 | 0.118 | -- | -- | -- | -0.08 | 11.7 | -- | -- | -- | -- |
| 24.35 | 0.23 | 11 | -0.217 | -- | -0.278 | -- | -- | -0.13 | -- | 89.08 | 53 | -- | -- |
| 24.48 | 0.23 | 11 | -- | 0.163 | -0.379 | -- | -- | -0.132 | 6.16 | 89 | 53 | -- | -- |
| 27.47 | 0.245 | 11 | -0.256 | -- | -- | -- | -- | -0.0814 | -- | -- | -- | -- | -- |
| 28.28 | 0.249 | 11 | -- | 0.121 | -- | -- | -- | -0.0518 | 11.8 | -- | -- | -- | -- |
| 25.58 | 0.236 | 11 | -- | -- | -0.296 | -- | -- | -0.111 | -- | 89 | 36 | -- | -- |
| 29.2 | 0.252 | 11 | -- | -- | -- | -- | -- | -0.0529 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.71 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 10 | 21 |
| 18 | 21.93 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 13 |
| 24 | 21.94 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 18 |
| 54 | 21.99 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 87 | 22.02 | humidity | 90.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 88 | 22.02 | humidity | 90.0 | 30 | > th | dose dependent | no | NA | NA |
| 106 | 22.02 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 107 | 22.02 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 119 | 22.04 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 171 | 22.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 197 | 22.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 199 | 22.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 212 | 22.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 390 | 22.36 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 8 |
| 396 | 22.36 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 13 |
| 536 | 22.61 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 543 | 22.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 583 | 22.70 | humidity | 90.0 | 90 | > th | dose independent | rect. | 10 | 21 |
| 598 | 22.72 | humidity | 90.0 | 90 | > th | dose independent | sin | 9 | NA |
| 616 | 22.75 | humidity | 90.0 | 90 | > th | dose independent | rect. | 17 | 14 |
| 618 | 22.75 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 648 | 22.83 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 657 | 22.85 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 683 | 22.89 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 684 | 22.89 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 696 | 22.90 | humidity | 90.0 | 90 | > th | dose independent | rect. | 17 | 19 |
| 702 | 22.91 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 716 | 22.93 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 738 | 22.95 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 744 | 22.96 | humidity | 90.0 | 90 | > th | dose independent | rect. | 21 | 10 |
| 795 | 23.00 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 810 | 23.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 814 | 23.02 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 835 | 23.04 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 853 | 23.05 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 23 |
| 854 | 23.05 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 858 | 23.06 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 9 |
| 863 | 23.07 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 5 |
| 864 | 23.07 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 8 |
| 865 | 23.07 | humidity | 90.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 887 | 23.08 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 20 |
| 912 | 23.10 | humidity | 90.0 | 90 | > th | dose independent | no | NA | NA |
| 918 | 23.10 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 11 |
| 955 | 23.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 956 | 23.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 968 | 23.13 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 971 | 23.13 | humidity | 90.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 1000 | 23.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |