Os05g0579500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0579500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 173.96 | 0.62 | 10.7 | -2.65 | 1.72 | 2.28 | 0.578 | 1.63 | -1.05 | 5.38 | 20.29 | 3433 | -- | -- |
| 175.13 | 0.616 | 10.7 | -3.02 | 1.73 | 2.24 | 0.514 | -- | -1.13 | 5.34 | 21.41 | 3324 | -- | -- |
| 174.48 | 0.615 | 10.7 | -2.63 | 1.72 | 2.19 | -- | 1.43 | -1.04 | 5.27 | 20.94 | 3308 | -- | -- |
| 175.68 | 0.617 | 10.7 | -3.02 | 1.72 | 2.23 | -- | -- | -1.14 | 5.29 | 21.46 | 3307 | -- | -- |
| 301.89 | 0.809 | 10.7 | -2.56 | -- | 2.15 | -- | 1.32 | -1.03 | -- | 21.53 | 2741 | -- | -- |
| 321.06 | 0.84 | 10.6 | -2.14 | 1.74 | -- | 0.433 | -- | -0.683 | 4.97 | -- | -- | -- | -- |
| 321.53 | 0.84 | 10.6 | -2.14 | 1.74 | -- | -- | -- | -0.686 | 4.94 | -- | -- | -- | -- |
| 303.4 | 0.811 | 10.7 | -2.95 | -- | 2.22 | -- | -- | -1.13 | -- | 21.87 | 2737 | -- | -- |
| 385.1 | 0.914 | 10.7 | -- | 1.73 | 1.76 | -- | -- | -0.736 | 5.92 | 22.3 | 2262 | -- | -- |
| 480.97 | 1.02 | 10.6 | -2.08 | -- | -- | -- | -- | -0.641 | -- | -- | -- | -- | -- |
| 442.7 | 0.984 | 10.6 | -- | 1.7 | -- | -- | -- | -0.447 | 4.98 | -- | -- | -- | -- |
| 506.07 | 1.05 | 10.6 | -- | -- | 1.45 | -- | -- | -0.576 | -- | 23.7 | 2720 | -- | -- |
| 595.14 | 1.14 | 10.6 | -- | -- | -- | -- | -- | -0.41 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.37 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 3 | 157.34 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 5 | 157.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 7 | 158.35 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 9 | 158.49 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 10 | 158.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 12 | 158.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 16 | 158.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 17 | 158.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 24 | 159.87 | radiation | 1 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 29 | 160.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 54 | 160.70 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 17 |
| 77 | 160.79 | radiation | 1 | 14400 | > th | dose independent | sin | 19 | NA |
| 115 | 160.91 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 129 | 161.02 | temperature | 30 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 133 | 161.14 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 21 |
| 145 | 161.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 16 |
| 146 | 161.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 19 |
| 154 | 161.17 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 157 | 161.24 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 158 | 161.25 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 163 | 161.29 | temperature | 25 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 166 | 161.30 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 16 |
| 168 | 161.31 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 174 | 161.39 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 175 | 161.39 | temperature | 15 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 195 | 161.49 | radiation | 1 | 14400 | < th | dose independent | sin | 21 | NA |
| 200 | 161.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 203 | 161.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 214 | 161.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 218 | 161.61 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 228 | 161.64 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 13 |
| 235 | 161.65 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 275 | 161.71 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 302 | 161.74 | temperature | 25 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 353 | 162.02 | temperature | 25 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 439 | 162.62 | temperature | 10 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 447 | 162.65 | radiation | 1 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 448 | 162.66 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 516 | 162.72 | temperature | 25 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 518 | 162.73 | radiation | 1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 522 | 162.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 12 | 23 |
| 531 | 162.76 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 548 | 162.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 592 | 162.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 731 | 163.25 | temperature | 25 | 43200 | < th | dose dependent | sin | 17 | NA |
| 793 | 163.48 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 822 | 163.64 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 878 | 163.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 947 | 164.13 | temperature | 25 | 43200 | < th | dose independent | sin | 16 | NA |