Os05g0576600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0576600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.96 | 0.581 | 11 | 1.18 | 0.913 | 1.49 | 1.27 | -0.434 | 1.4 | 8.53 | 0.0004388 | 4390 | 6.97 | 0.85 |
| 153.13 | 0.576 | 11 | 1.2 | 0.909 | 1.41 | 1.27 | -- | 1.4 | 8.5 | 9.763e-06 | 4383 | 6.97 | 0.847 |
| 158.1 | 0.586 | 11 | 1.23 | 0.912 | 1.48 | -- | -0.375 | 1.4 | 8.47 | 0.002259 | 4387 | 6.97 | 0.844 |
| 158.21 | 0.586 | 11 | 1.23 | 0.913 | 1.42 | -- | -- | 1.4 | 8.47 | 0.01387 | 4386 | 6.96 | 0.84 |
| 198.94 | 0.657 | 11 | 1.17 | -- | 1.63 | -- | -0.562 | 1.39 | -- | 0.09344 | 4723 | 6.98 | 0.832 |
| 193.44 | 0.652 | 11 | 1.73 | 0.935 | -- | 1.25 | -- | 1.24 | 8.62 | -- | -- | -- | -- |
| 198.51 | 0.66 | 11 | 1.77 | 0.933 | -- | -- | -- | 1.24 | 8.57 | -- | -- | -- | -- |
| 198.97 | 0.657 | 11 | 1.17 | -- | 1.54 | -- | -- | 1.41 | -- | 0.0003638 | 4717 | 6.96 | 0.9 |
| 189.73 | 0.642 | 11 | -- | 0.847 | 1.92 | -- | -- | 1.39 | 8.08 | 0.09889 | 4705 | 6.96 | 0.845 |
| 247.42 | 0.735 | 11 | 1.77 | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
| 280.72 | 0.784 | 11 | -- | 0.94 | -- | -- | -- | 1.04 | 8.43 | -- | -- | -- | -- |
| 228.32 | 0.704 | 11 | -- | -- | 2.03 | -- | -- | 1.35 | -- | 0.1 | 4705 | 6.96 | 0.9 |
| 330.01 | 0.848 | 11.1 | -- | -- | -- | -- | -- | 1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 164.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 164.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 164.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 165.10 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 7 | 166.09 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 9 | 166.24 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 17 | 167.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 19 | 167.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 21 | 167.21 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 23 | 167.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 32 | 167.35 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 35 | 167.38 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 64 | 167.40 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 88 | 167.48 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 111 | 167.62 | wind | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 234 | 168.46 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 236 | 168.46 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 246 | 168.53 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 291 | 168.71 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 313 | 168.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 346 | 168.91 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 6 | 6 |
| 386 | 169.15 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 495 | 169.61 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 498 | 169.62 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 18 |
| 507 | 169.65 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 526 | 169.71 | wind | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 542 | 169.76 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 548 | 169.77 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 552 | 169.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 553 | 169.79 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 611 | 169.90 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 628 | 169.95 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 666 | 170.01 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 690 | 170.10 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 695 | 170.11 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 729 | 170.18 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 930 | 170.97 | wind | 5.0 | 1440 | < th | dose independent | rect. | 8 | 2 |
| 932 | 170.99 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 951 | 171.06 | wind | 5.0 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 988 | 171.22 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 999 | 171.26 | temperature | 25.0 | 10 | < th | dose dependent | sin | 20 | NA |