Os05g0573300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP synthetase 1).
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Os05g0573300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CTP synthase 1 (EC 6.3.4.2) (UTP--ammonia ligase 1) (CTP synthetase 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.8 | 0.469 | 11.7 | -0.728 | 2.06 | 1.04 | -1.34 | 1.58 | 0.4 | 13.4 | 80 | 1534 | -- | -- |
| 101.74 | 0.47 | 11.6 | -0.606 | 2.08 | 1.13 | -1.46 | -- | 0.42 | 13.4 | 81 | 1551 | -- | -- |
| 106.52 | 0.481 | 11.7 | -0.819 | 2.08 | 0.962 | -- | 2.19 | 0.377 | 13.4 | 80.49 | 1596 | -- | -- |
| 110.23 | 0.489 | 11.7 | -0.642 | 2.11 | 1.11 | -- | -- | 0.422 | 13.4 | 80 | 1583 | -- | -- |
| 250.69 | 0.741 | 11.7 | -0.885 | -- | -1.03 | -- | 0.92 | 0.329 | -- | 77 | 2512 | -- | -- |
| 116.67 | 0.506 | 11.7 | -0.623 | 2.01 | -- | -1.34 | -- | 0.363 | 13.3 | -- | -- | -- | -- |
| 123.98 | 0.521 | 11.7 | -0.668 | 2.01 | -- | -- | -- | 0.356 | 13.4 | -- | -- | -- | -- |
| 256.04 | 0.749 | 11.7 | -0.849 | -- | -1.03 | -- | -- | 0.339 | -- | 77 | 2512 | -- | -- |
| 121.52 | 0.513 | 11.6 | -- | 2.11 | 1.12 | -- | -- | 0.488 | 13.4 | 80.1 | 1561 | -- | -- |
| 373.18 | 0.903 | 11.7 | -0.747 | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
| 135.76 | 0.545 | 11.7 | -- | 2.02 | -- | -- | -- | 0.431 | 13.4 | -- | -- | -- | -- |
| 274.84 | 0.775 | 11.7 | -- | -- | -1.06 | -- | -- | 0.397 | -- | 74 | 1069 | -- | -- |
| 387.92 | 0.919 | 11.7 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.90 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 3 | 97.97 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 15 | 98.18 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 30 | 98.51 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 52 | 98.69 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 58 | 98.72 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 76 | 98.86 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 96 | 99.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 114 | 99.13 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 120 | 99.15 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 127 | 99.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 140 | 99.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 142 | 99.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 146 | 99.26 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 153 | 99.31 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 155 | 99.32 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 156 | 99.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 157 | 99.33 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 5 |
| 158 | 99.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 170 | 99.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 8 |
| 171 | 99.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 8 |
| 176 | 99.39 | humidity | 70.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 193 | 99.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 197 | 99.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 199 | 99.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 19 |
| 212 | 99.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 214 | 99.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 217 | 99.48 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 218 | 99.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 221 | 99.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 226 | 99.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 230 | 99.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 19 |
| 231 | 99.50 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 15 |
| 232 | 99.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 16 |
| 237 | 99.50 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 245 | 99.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 21 |
| 286 | 99.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 289 | 99.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 296 | 99.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 21 |
| 319 | 99.60 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 330 | 99.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 331 | 99.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 335 | 99.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 337 | 99.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 339 | 99.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 340 | 99.62 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 372 | 99.66 | humidity | 80.0 | 1440 | > th | dose independent | sin | 20 | NA |
| 383 | 99.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 390 | 99.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 421 | 99.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 423 | 99.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 10 |
| 436 | 99.71 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 13 |
| 476 | 99.75 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 17 | NA |
| 484 | 99.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 491 | 99.76 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 515 | 99.79 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 17 | NA |
| 519 | 99.79 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 17 | NA |
| 521 | 99.79 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 570 | 99.84 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 582 | 99.86 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 589 | 99.87 | humidity | 70.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 620 | 99.90 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 621 | 99.90 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 639 | 99.93 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 651 | 99.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 668 | 99.95 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 15 | NA |
| 693 | 99.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 704 | 99.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 764 | 100.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 18 |
| 767 | 100.06 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 777 | 100.07 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 877 | 100.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 910 | 100.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 18 |
| 911 | 100.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 21 |
| 948 | 100.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 980 | 100.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 22 |