Os05g0568100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Iron sulfur cluster assembly protein 1, mitochondrial precursor (Iron sulfur cluster scaffold protein 1).
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Os05g0568100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Iron sulfur cluster assembly protein 1, mitochondrial precursor (Iron sulfur cluster scaffold protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.54 | 0.406 | 11.1 | 1.09 | 0.991 | -0.682 | 0.404 | -0.0736 | -0.00462 | 14.9 | 20.04 | 15 | -- | -- |
| 74.56 | 0.402 | 11 | 1.1 | 0.989 | -0.677 | 0.367 | -- | -0.00173 | 14.9 | 20.05 | 14 | -- | -- |
| 74.99 | 0.403 | 11 | 1.12 | 0.989 | -0.666 | -- | 0.0592 | 0.00149 | 14.9 | 20.09 | 14 | -- | -- |
| 75.01 | 0.403 | 11 | 1.11 | 0.99 | -0.67 | -- | -- | -0.00082 | 14.9 | 20.09 | 14 | -- | -- |
| 127.53 | 0.526 | 11 | 1.04 | -- | -0.349 | -- | 0.268 | -0.0571 | -- | 20.4 | 44 | -- | -- |
| 92.7 | 0.451 | 11.1 | 0.928 | 0.849 | -- | 0.203 | -- | -0.124 | 15.2 | -- | -- | -- | -- |
| 92.83 | 0.451 | 11.1 | 0.933 | 0.851 | -- | -- | -- | -0.123 | 15.2 | -- | -- | -- | -- |
| 127.05 | 0.525 | 11.1 | 1.03 | -- | -0.442 | -- | -- | -0.0541 | -- | 20.6 | 263 | -- | -- |
| 105.99 | 0.479 | 11.1 | -- | 0.929 | -0.479 | -- | -- | -0.152 | 15 | 20 | 9 | -- | -- |
| 133.93 | 0.541 | 11.1 | 0.896 | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
| 115.75 | 0.503 | 11.1 | -- | 0.833 | -- | -- | -- | -0.227 | 15.2 | -- | -- | -- | -- |
| 121.42 | 0.513 | 11.1 | -- | -- | 0.582 | -- | -- | -0.391 | -- | 26.6 | 14 | -- | -- |
| 155.13 | 0.581 | 11.1 | -- | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.90 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 9 | 67.74 | temperature | 20 | 10 | > th | dose independent | sin | 13 | NA |
| 14 | 68.37 | temperature | 20 | 10 | < th | dose independent | sin | 13 | NA |
| 32 | 69.21 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 9 |
| 50 | 69.85 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 17 |
| 57 | 69.96 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 19 |
| 59 | 70.04 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 11 |
| 76 | 70.37 | temperature | 20 | 90 | < th | dose independent | rect. | 16 | 13 |
| 79 | 70.46 | temperature | 20 | 10 | < th | dose independent | rect. | 17 | 15 |
| 153 | 71.26 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 21 |
| 194 | 71.67 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 23 |
| 210 | 71.81 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 21 |
| 246 | 72.02 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 6 |
| 274 | 72.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 324 | 72.48 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 329 | 72.49 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 10 |
| 393 | 72.81 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 444 | 73.08 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 451 | 73.16 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 521 | 73.56 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 9 |
| 529 | 73.59 | temperature | 25 | 270 | < th | dose dependent | sin | 15 | NA |
| 571 | 73.79 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 23 |
| 709 | 74.53 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 22 |
| 750 | 74.69 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 22 |
| 764 | 74.77 | temperature | 20 | 10 | > th | dose independent | no | NA | NA |
| 818 | 74.97 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 823 | 74.98 | temperature | 20 | 10 | < th | dose independent | rect. | 6 | 20 |
| 828 | 74.98 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 829 | 74.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 899 | 75.21 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 921 | 75.30 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 23 |
| 923 | 75.31 | temperature | 20 | 10 | < th | dose independent | no | NA | NA |
| 926 | 75.31 | temperature | 20 | 10 | < th | dose independent | rect. | 9 | 23 |
| 947 | 75.36 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 23 |
| 948 | 75.36 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 970 | 75.45 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 973 | 75.45 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 23 |
| 999 | 75.53 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 23 |