Os05g0566200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Small CTD phosphatase 1 splice variant.
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Os05g0566200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Small CTD phosphatase 1 splice variant.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.43 | 0.38 | 9.21 | 1.22 | 1.45 | -0.511 | -0.12 | 0.341 | 0.221 | 6.43 | 20 | 112 | -- | -- |
| 65.78 | 0.378 | 9.21 | 1.19 | 1.44 | -0.566 | -0.193 | -- | 0.218 | 6.41 | 20.07 | 159 | -- | -- |
| 65.47 | 0.377 | 9.2 | 1.22 | 1.45 | -0.51 | -- | 0.352 | 0.222 | 6.43 | 20.02 | 116 | -- | -- |
| 65.9 | 0.378 | 9.21 | 1.18 | 1.44 | -0.562 | -- | -- | 0.214 | 6.42 | 20.1 | 159 | -- | -- |
| 135.77 | 0.543 | 9.28 | 1.02 | -- | -0.864 | -- | -1.07 | 0.254 | -- | 26.36 | 398 | -- | -- |
| 76.22 | 0.409 | 9.23 | 1.01 | 1.49 | -- | -0.174 | -- | 0.115 | 6.17 | -- | -- | -- | -- |
| 76.29 | 0.409 | 9.23 | 1.01 | 1.49 | -- | -- | -- | 0.116 | 6.18 | -- | -- | -- | -- |
| 134.02 | 0.539 | 9.2 | 1.31 | -- | -0.946 | -- | -- | 0.44 | -- | 25.8 | 395 | -- | -- |
| 99.84 | 0.465 | 9.24 | -- | 1.49 | -0.283 | -- | -- | 0.0736 | 6.25 | 20.6 | 145 | -- | -- |
| 191.38 | 0.646 | 9.26 | 1.05 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 103.34 | 0.476 | 9.26 | -- | 1.5 | -- | -- | -- | 0.00336 | 6.14 | -- | -- | -- | -- |
| 177.5 | 0.621 | 9.24 | -- | -- | -0.8 | -- | -- | 0.258 | -- | 25.87 | 376 | -- | -- |
| 220.71 | 0.693 | 9.29 | -- | -- | -- | -- | -- | 0.0321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.07 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 11 |
| 4 | 61.35 | temperature | 20 | 90 | < th | dose independent | sin | 7 | NA |
| 5 | 61.40 | temperature | 20 | 90 | > th | dose independent | sin | 6 | NA |
| 8 | 61.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 17 | 62.23 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 12 |
| 25 | 62.47 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 23 |
| 42 | 63.23 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 10 |
| 49 | 63.29 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 8 |
| 58 | 63.46 | temperature | 25 | 90 | < th | dose dependent | sin | 7 | NA |
| 68 | 63.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 5 |
| 85 | 63.86 | temperature | 30 | 10 | < th | dose dependent | sin | 7 | NA |
| 106 | 64.07 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 20 |
| 116 | 64.24 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 120 | 64.26 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 20 |
| 121 | 64.28 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 22 |
| 124 | 64.30 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 7 |
| 130 | 64.35 | temperature | 20 | 10 | < th | dose independent | rect. | 24 | 12 |
| 133 | 64.36 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 22 |
| 141 | 64.44 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 13 |
| 146 | 64.48 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 18 |
| 178 | 64.65 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 14 |
| 181 | 64.65 | temperature | 20 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 210 | 64.80 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 11 |
| 334 | 65.29 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 5 |
| 396 | 65.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 407 | 65.50 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 412 | 65.51 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 439 | 65.61 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 442 | 65.62 | temperature | 20 | 90 | < th | dose independent | rect. | 11 | 23 |
| 444 | 65.63 | temperature | 20 | 90 | < th | dose independent | rect. | 9 | 23 |
| 535 | 65.84 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 9 |
| 549 | 65.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 20 | 10 |
| 610 | 66.00 | temperature | 20 | 30 | > th | dose independent | rect. | 6 | 23 |
| 726 | 66.24 | temperature | 20 | 90 | > th | dose independent | rect. | 1 | 23 |
| 746 | 66.30 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 769 | 66.35 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 21 | 21 |
| 807 | 66.41 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 890 | 66.57 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 11 |
| 924 | 66.63 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |