Os05g0565100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome b561 / ferric reductase transmembrane domain containing protein.
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Os05g0565100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome b561 / ferric reductase transmembrane domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.71 | 0.723 | 3.23 | -0.122 | 0.275 | -0.855 | -0.747 | -0.227 | -0.025 | 13.3 | 15.08 | 274 | -- | -- |
| 236.74 | 0.717 | 3.23 | -0.0851 | 0.28 | -0.855 | -0.783 | -- | -0.0143 | 13.3 | 15.4 | 263 | -- | -- |
| 238.49 | 0.719 | 3.24 | -0.243 | 0.291 | -0.751 | -- | -0.719 | -0.0598 | 12 | 16.32 | 228 | -- | -- |
| 238.85 | 0.72 | 3.23 | -0.124 | 0.304 | -0.807 | -- | -- | -0.0264 | 11.8 | 15.3 | 206 | -- | -- |
| 240.45 | 0.722 | 3.24 | -0.146 | -- | -0.817 | -- | -0.213 | -0.0326 | -- | 14.8 | 608 | -- | -- |
| 246.3 | 0.736 | 3.25 | -0.293 | 0.282 | -- | -0.223 | -- | -0.145 | 9.44 | -- | -- | -- | -- |
| 246.36 | 0.735 | 3.25 | -0.303 | 0.291 | -- | -- | -- | -0.147 | 8.82 | -- | -- | -- | -- |
| 240.48 | 0.722 | 3.23 | -0.107 | -- | -0.82 | -- | -- | -0.0221 | -- | 14.9 | 609 | -- | -- |
| 239.15 | 0.72 | 3.22 | -- | 0.333 | -0.902 | -- | -- | -0.00587 | 12.2 | 15 | 183 | -- | -- |
| 251.17 | 0.741 | 3.26 | -0.303 | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
| 248.78 | 0.738 | 3.25 | -- | 0.29 | -- | -- | -- | -0.113 | 8.9 | -- | -- | -- | -- |
| 240.76 | 0.723 | 3.23 | -- | -- | -0.86 | -- | -- | -0.0048 | -- | 14.8 | 616 | -- | -- |
| 253.59 | 0.743 | 3.25 | -- | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.04 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 1 |
| 2 | 232.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 5 | 5 |
| 4 | 232.67 | temperature | 20 | 720 | < th | dose dependent | rect. | 1 | 1 |
| 7 | 233.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 8 | 233.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 9 | 233.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 13 | 233.24 | humidity | 60 | 30 | > th | dose independent | rect. | 11 | 7 |
| 39 | 233.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 47 | 233.85 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 14 |
| 49 | 233.87 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 70 | 234.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 76 | 234.14 | temperature | 20 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 83 | 234.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 90 | 234.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 18 |
| 94 | 234.22 | wind | 3 | 30 | > th | dose independent | rect. | 11 | 7 |
| 99 | 234.26 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 100 | 234.27 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 107 | 234.30 | humidity | 60 | 30 | > th | dose independent | rect. | 11 | 5 |
| 108 | 234.30 | wind | 7 | 10 | < th | dose independent | rect. | 4 | 12 |
| 112 | 234.32 | temperature | 15 | 720 | > th | dose independent | rect. | 3 | 2 |
| 116 | 234.33 | wind | 9 | 90 | < th | dose dependent | rect. | 3 | 13 |
| 167 | 234.56 | wind | 9 | 10 | < th | dose independent | rect. | 13 | 23 |
| 170 | 234.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 176 | 234.58 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 5 |
| 199 | 234.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 201 | 234.66 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 206 | 234.68 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 207 | 234.68 | temperature | 25 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 213 | 234.70 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 221 | 234.72 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 223 | 234.72 | wind | 9 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 262 | 234.84 | humidity | 60 | 30 | > th | dose independent | rect. | 11 | 11 |
| 270 | 234.86 | temperature | 25 | 10 | < th | dose independent | rect. | 4 | 9 |
| 272 | 234.86 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 278 | 234.88 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 280 | 234.88 | wind | 5 | 90 | < th | dose independent | rect. | 3 | 13 |
| 288 | 234.89 | humidity | 60 | 30 | > th | dose independent | rect. | 11 | 15 |
| 341 | 234.99 | humidity | 60 | 90 | > th | dose independent | rect. | 11 | 2 |
| 353 | 235.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 381 | 235.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 9 |
| 397 | 235.06 | atmosphere | 1000 | 14400 | > th | dose independent | sin | 23 | NA |
| 424 | 235.10 | atmosphere | 1000 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 451 | 235.15 | atmosphere | 1000 | 14400 | < th | dose independent | sin | 23 | NA |
| 465 | 235.16 | temperature | 20 | 270 | < th | dose dependent | sin | 2 | NA |
| 499 | 235.20 | temperature | 20 | 270 | < th | dose dependent | rect. | 8 | 11 |
| 508 | 235.22 | humidity | 50 | 90 | > th | dose dependent | rect. | 11 | 2 |
| 526 | 235.24 | radiation | 40 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 530 | 235.24 | wind | 3 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 594 | 235.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 599 | 235.32 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 604 | 235.33 | temperature | 15 | 90 | > th | dose independent | rect. | 3 | 12 |
| 642 | 235.36 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 20 |
| 655 | 235.38 | wind | 3 | 90 | > th | dose independent | rect. | 11 | 2 |
| 683 | 235.40 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 20 |
| 684 | 235.40 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 22 |
| 711 | 235.43 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 725 | 235.44 | temperature | 15 | 720 | > th | dose independent | rect. | 1 | 14 |
| 733 | 235.45 | temperature | 15 | 720 | > th | dose independent | rect. | 3 | 10 |
| 899 | 235.62 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 3 | 2 |
| 943 | 235.65 | radiation | 1 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 986 | 235.69 | temperature | 20 | 270 | < th | dose dependent | rect. | 2 | 18 |