Os05g0563000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os05g0563000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 604.06 | 1.15 | 4.58 | -3.87 | 0.553 | -1.01 | 0.107 | 3.88 | -0.982 | 5 | 89.2 | 729 | -- | -- |
| 628.66 | 1.17 | 4.6 | -3.51 | 0.626 | -1.17 | 1.38 | -- | -0.973 | 6.45 | 83.36 | 781 | -- | -- |
| 603.89 | 1.14 | 4.58 | -3.86 | 0.579 | -1.04 | -- | 3.82 | -0.985 | 5.3 | 88.22 | 725 | -- | -- |
| 632.66 | 1.17 | 4.59 | -3.48 | 0.628 | -1.09 | -- | -- | -0.918 | 6.09 | 83 | 785 | -- | -- |
| 618.54 | 1.16 | 4.57 | -3.89 | -- | -0.814 | -- | 3.92 | -0.928 | -- | 88.67 | 778 | -- | -- |
| 651.54 | 1.2 | 4.57 | -3.59 | 0.477 | -- | -0.19 | -- | -0.769 | 2.68 | -- | -- | -- | -- |
| 651.63 | 1.2 | 4.57 | -3.59 | 0.48 | -- | -- | -- | -0.768 | 2.87 | -- | -- | -- | -- |
| 642.64 | 1.18 | 4.6 | -3.49 | -- | -1.16 | -- | -- | -0.887 | -- | 78 | 1146 | -- | -- |
| 945.53 | 1.43 | 4.54 | -- | 0.522 | -1.56 | -- | -- | -0.579 | 7.55 | 84.46 | 868 | -- | -- |
| 664.92 | 1.2 | 4.57 | -3.57 | -- | -- | -- | -- | -0.755 | -- | -- | -- | -- | -- |
| 990.7 | 1.47 | 4.48 | -- | 0.409 | -- | -- | -- | -0.368 | 2.8 | -- | -- | -- | -- |
| 949.16 | 1.43 | 4.55 | -- | -- | -1.73 | -- | -- | -0.658 | -- | 85.57 | 1241 | -- | -- |
| 1000.41 | 1.48 | 4.48 | -- | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 578.87 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 2 | 579.12 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 9 | 588.93 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 13 | 590.09 | wind | 3 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 14 | 590.56 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 15 | 590.61 | wind | 3 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 18 | 591.03 | wind | 3 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 20 | 591.53 | humidity | 90 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 22 | 591.93 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 38 | 591.93 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 55 | 592.05 | wind | 3 | 4320 | > th | dose independent | rect. | 23 | 11 |
| 66 | 593.40 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 73 | 593.84 | humidity | 80 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 84 | 594.51 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 86 | 594.64 | wind | 5 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 89 | 594.94 | wind | 5 | 4320 | < th | dose dependent | rect. | 5 | 4 |
| 90 | 595.04 | wind | 1 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 92 | 595.33 | wind | 9 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 95 | 595.43 | wind | 5 | 4320 | < th | dose dependent | rect. | 22 | 12 |
| 124 | 596.54 | wind | 1 | 14400 | < th | dose independent | sin | 11 | NA |
| 129 | 596.70 | wind | 5 | 4320 | < th | dose dependent | rect. | 1 | 8 |
| 131 | 596.75 | wind | 1 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 176 | 597.77 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 182 | 597.98 | wind | 1 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 190 | 598.15 | wind | 1 | 4320 | > th | dose dependent | rect. | 5 | 4 |
| 193 | 598.25 | humidity | 90 | 720 | < th | dose independent | rect. | 22 | 18 |
| 202 | 598.48 | humidity | 90 | 720 | < th | dose independent | rect. | 21 | 16 |
| 204 | 598.54 | wind | 1 | 14400 | > th | dose independent | sin | 11 | NA |
| 207 | 598.65 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 216 | 598.70 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 219 | 598.78 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 242 | 599.18 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 19 |
| 246 | 599.22 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 253 | 599.36 | wind | 1 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 276 | 599.62 | radiation | 40 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 293 | 599.62 | radiation | 40 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 328 | 599.93 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 331 | 599.95 | humidity | 90 | 720 | > th | dose independent | rect. | 22 | 8 |
| 352 | 600.27 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 378 | 600.72 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 22 |
| 394 | 600.93 | humidity | 90 | 720 | > th | dose dependent | rect. | 22 | 8 |
| 404 | 601.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 442 | 601.40 | humidity | 60 | 720 | > th | dose dependent | rect. | 19 | 11 |
| 443 | 601.40 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 445 | 601.42 | wind | 5 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 446 | 601.42 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 452 | 601.45 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 466 | 601.51 | humidity | 90 | 720 | < th | dose independent | sin | 6 | NA |
| 470 | 601.53 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 474 | 601.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 525 | 601.96 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 532 | 602.03 | humidity | 50 | 720 | > th | dose dependent | rect. | 22 | 8 |
| 533 | 602.06 | wind | 1 | 4320 | > th | dose dependent | rect. | 22 | 12 |
| 614 | 602.41 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 639 | 602.59 | wind | 1 | 14400 | < th | dose dependent | sin | 7 | NA |
| 674 | 602.79 | humidity | 90 | 720 | > th | dose independent | sin | 9 | NA |
| 675 | 602.79 | radiation | 10 | 1440 | < th | dose dependent | sin | 18 | NA |
| 678 | 602.81 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 9 |
| 733 | 603.07 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 790 | 603.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 859 | 603.84 | humidity | 90 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 870 | 603.95 | wind | 1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 872 | 603.96 | humidity | 90 | 720 | > th | dose independent | rect. | 5 | 1 |
| 879 | 604.02 | humidity | 90 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 888 | 604.09 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 22 |
| 890 | 604.11 | humidity | 90 | 720 | > th | dose dependent | sin | 10 | NA |
| 942 | 604.35 | humidity | 90 | 720 | > th | dose dependent | no | NA | NA |
| 950 | 604.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 958 | 604.42 | humidity | 90 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 966 | 604.48 | temperature | 15 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 980 | 604.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 20 |