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Os05g0561600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1421 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0275) R2 : 0.908
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.28 (0.0792) R2dC : 1.19 R2C : 0.706
β3 : 2.91 (0.106) R2dE : 0.2 R2E : -0.302
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.335 (0.0579) R2dN8 : 0.00912 R2N8 : -0.00608
σ : 0.514
deviance : 121.76
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C
peak time of C : 8.53
E
wheather : temperature
threshold : 36.09
memory length : 258
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 16.8
open length of G : 10.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
104.61 0.481 11.3 0.684 5.13 2.62 0.789 -1.26 0.43 8.25 32.4 264 16.2 11
106.62 0.481 11.3 0.667 5.12 2.86 1.24 -- 0.415 8.35 32.81 258 16.7 10.7
105.28 0.478 11.3 0.721 5.32 2.9 -- -1.53 0.458 8.44 35.11 272 16.2 11
112.17 0.493 11.3 0.647 5.24 2.98 -- -- 0.423 8.5 34.69 251 16.8 10.6
180.12 0.625 11.5 -0.07 -- 4.41 -- -1.33 0.103 -- 188 795 20.6 7.7
152.3 0.579 11.4 0.345 4.68 -- 1.6 -- 0.194 7.19 -- -- -- --
159.04 0.591 11.4 0.376 4.68 -- -- -- 0.19 7.16 -- -- -- --
151.87 0.574 11.5 0.399 -- 4.61 -- -- 0.253 -- 208.3 784 20.7 7.82
121.76 0.514 11.3 -- 5.28 2.91 -- -- 0.335 8.53 36.09 258 16.8 10.6
1317.47 1.7 11.5 0.464 -- -- -- -- 0.272 -- -- -- -- --
162.77 0.597 11.4 -- 4.69 -- -- -- 0.148 7.15 -- -- -- --
155.64 0.581 11.5 -- -- 4.63 -- -- 0.188 -- 349.2 787 20.5 8.17
1323.14 1.7 11.5 -- -- -- -- -- 0.221 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 106.65 temperature 30.0 270 < th dose dependent rect. 16 11
19 112.61 temperature 30.0 270 < th dose dependent sin 16 NA
20 112.64 temperature 20.0 270 > th dose independent rect. 13 11
36 114.17 temperature 10.0 270 > th dose dependent rect. 13 11
62 115.82 radiation 10.0 10 > th dose independent rect. 10 6
63 115.82 radiation 10.0 10 > th dose independent rect. 10 8
83 116.29 radiation 10.0 10 > th dose independent sin 21 NA
133 117.73 temperature 20.0 90 < th dose independent rect. 17 10
141 117.95 temperature 10.0 270 > th dose dependent sin 15 NA
169 118.24 temperature 30.0 720 < th dose dependent rect. 17 2
195 118.43 temperature 20.0 10 < th dose independent rect. 18 10
216 118.55 temperature 30.0 270 < th dose dependent rect. 11 16
249 118.92 temperature 10.0 270 > th dose dependent rect. 14 18
284 119.34 radiation 10.0 270 > th dose independent rect. 9 4
311 119.73 temperature 30.0 720 < th dose dependent rect. 15 5
324 119.93 temperature 20.0 90 < th dose independent sin 14 NA
443 121.18 atmosphere 995.0 270 > th dose dependent rect. 17 11
475 121.49 humidity 70.0 270 > th dose independent rect. 17 11
493 121.69 precipitation 0.1 270 < th dose independent rect. 13 20
494 121.69 precipitation 0.1 270 < th dose dependent rect. 13 20
501 121.82 precipitation 0.1 270 < th dose independent rect. 14 18
502 121.82 precipitation 0.1 270 < th dose dependent rect. 14 18
519 122.00 temperature 10.0 720 > th dose dependent rect. 13 4
524 122.05 atmosphere 1015.0 270 < th dose independent rect. 14 18
525 122.06 humidity 90.0 10 < th dose independent rect. 10 6
539 122.15 radiation 10.0 270 > th dose independent rect. 11 1
541 122.17 atmosphere 1015.0 270 < th dose independent rect. 13 20
562 122.27 temperature 20.0 90 > th dose independent rect. 15 18
570 122.32 temperature 15.0 270 > th dose independent rect. 13 20
633 122.63 temperature 10.0 43200 > th dose independent rect. 10 7
681 122.94 wind 9.0 270 < th dose independent rect. 13 20
684 122.95 temperature 30.0 270 < th dose independent rect. 17 11
693 123.02 temperature 10.0 10 > th dose dependent rect. 16 18
708 123.10 temperature 20.0 270 > th dose independent rect. 9 4
711 123.12 radiation 30.0 10 < th dose dependent rect. 13 21
713 123.14 temperature 15.0 1440 > th dose independent rect. 11 6
720 123.18 temperature 30.0 720 < th dose dependent rect. 11 10
733 123.25 temperature 10.0 10 > th dose dependent rect. 10 6
738 123.26 atmosphere 995.0 270 > th dose independent rect. 9 4
739 123.26 atmosphere 1015.0 270 < th dose independent rect. 9 4
740 123.26 precipitation 0.1 270 < th dose independent rect. 9 4
758 123.26 precipitation 0.1 270 < th dose dependent rect. 9 4
762 123.27 atmosphere 1015.0 10 < th dose independent rect. 16 18
788 123.40 temperature 25.0 270 < th dose dependent rect. 21 2
793 123.42 radiation 1.0 270 < th dose dependent rect. 16 12
803 123.48 wind 9.0 270 < th dose independent rect. 9 4
816 123.54 precipitation 0.1 270 < th dose independent rect. 8 6
817 123.54 precipitation 0.1 270 < th dose dependent rect. 8 6
838 123.60 wind 1.0 270 > th dose independent rect. 13 19
847 123.63 wind 9.0 270 < th dose independent rect. 14 18
849 123.63 wind 9.0 270 < th dose dependent rect. 9 4
862 123.66 temperature 20.0 10 < th dose dependent rect. 12 16
875 123.72 radiation 1.0 270 < th dose independent rect. 16 12
886 123.76 temperature 20.0 10 > th dose independent rect. 16 18
903 123.81 temperature 15.0 270 > th dose independent rect. 12 23
914 123.86 temperature 20.0 270 > th dose independent rect. 8 6
940 123.90 temperature 10.0 270 > th dose independent rect. 8 6
941 123.90 atmosphere 995.0 270 > th dose independent rect. 8 6
942 123.90 atmosphere 1015.0 270 < th dose independent rect. 8 6
965 123.98 temperature 10.0 90 > th dose dependent rect. 9 6
994 124.02 temperature 15.0 10 > th dose dependent rect. 16 10