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Os05g0557700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin-conjugating enzyme, E2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.03) R2 : 0.704
β1 : 2.46 (0.116) R2dD : 0.342 R2D : 0.367
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.04 (0.147) R2dE : 0.147 R2E : 0.291
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.823 (0.0657) R2dN8 : 0.145 R2N8 : 0.082
σ : 0.558
deviance : 143.48
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C
peak time of C : --
E
wheather : wind
threshold : 6.397
memory length : 2474
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
117.02 0.508 12.6 2.62 0.452 -1.28 1.74 4.18 0.809 2.54 5.891 2402 -- --
119.64 0.509 12.6 2.46 0.427 -2.06 1.74 -- 0.811 2.5 6.249 2474 -- --
126.27 0.523 12.6 2.59 0.505 -1.13 -- 5.32 0.799 3.67 5.382 2443 -- --
130.21 0.531 12.6 2.48 0.502 -2.07 -- -- 0.827 3.48 6.2 2477 -- --
139.86 0.551 12.7 2.64 -- -1 -- 5.37 0.799 -- 5.9 2423 -- --
179.6 0.628 12.5 3.06 0.331 -- 2.19 -- 1.05 2.16 -- -- -- --
193.64 0.652 12.5 2.99 0.448 -- -- -- 1.03 4.63 -- -- -- --
143.48 0.558 12.6 2.46 -- -2.04 -- -- 0.823 -- 6.397 2474 -- --
275.61 0.773 12.5 -- 0.339 -2.49 -- -- 1.14 3.74 5.959 6946 -- --
204.3 0.668 12.5 3.01 -- -- -- -- 1.04 -- -- -- -- --
429.77 0.97 12.6 -- 0.504 -- -- -- 0.7 4.47 -- -- -- --
278.77 0.778 12.5 -- -- -2.72 -- -- 0.996 -- 5.294 4920 -- --
443.34 0.983 12.6 -- -- -- -- -- 0.711 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.05 radiation 10 43200 > th dose independent rect. 17 1
14 108.69 wind 9 4320 > th dose independent rect. 17 1
15 109.06 temperature 20 14400 < th dose dependent rect. 9 5
17 109.17 temperature 20 14400 < th dose dependent rect. 11 2
18 109.18 wind 9 4320 < th dose independent rect. 17 1
21 109.26 temperature 20 14400 < th dose dependent rect. 9 1
39 110.38 temperature 20 14400 < th dose independent rect. 12 2
40 110.40 temperature 20 14400 > th dose independent rect. 12 2
42 110.44 wind 9 4320 > th dose independent rect. 17 4
44 110.52 temperature 20 14400 < th dose dependent rect. 6 11
46 110.54 humidity 60 43200 < th dose independent rect. 7 5
48 110.56 temperature 20 14400 < th dose dependent rect. 6 13
51 110.60 radiation 1 14400 > th dose independent rect. 9 1
52 110.60 radiation 1 14400 < th dose independent rect. 9 1
58 110.67 wind 9 4320 < th dose independent rect. 17 3
59 110.67 wind 7 4320 > th dose dependent rect. 15 5
66 110.82 wind 9 4320 > th dose independent rect. 15 4
68 110.86 temperature 15 14400 > th dose independent rect. 9 1
82 111.02 humidity 60 43200 > th dose independent rect. 7 4
84 111.05 temperature 15 14400 > th dose independent rect. 4 8
88 111.09 wind 7 4320 > th dose dependent rect. 17 1
102 111.39 humidity 60 43200 < th dose independent rect. 10 1
114 111.71 humidity 60 43200 < th dose independent rect. 18 18
127 111.90 temperature 20 14400 < th dose dependent sin 22 NA
132 111.95 temperature 15 14400 > th dose independent rect. 2 4
133 111.95 temperature 15 14400 < th dose independent rect. 2 4
134 111.95 radiation 10 43200 < th dose independent rect. 1 4
137 112.00 radiation 10 43200 < th dose independent rect. 3 3
139 112.03 radiation 1 14400 < th dose dependent rect. 24 5
148 112.07 radiation 1 43200 > th dose independent rect. 4 1
159 112.07 radiation 1 43200 > th dose dependent rect. 4 1
170 112.09 radiation 10 43200 < th dose independent rect. 21 9
177 112.14 temperature 15 14400 < th dose independent rect. 5 1
178 112.14 radiation 10 43200 < th dose independent rect. 19 11
183 112.17 temperature 15 14400 > th dose independent rect. 5 1
198 112.28 radiation 1 14400 < th dose dependent rect. 21 8
200 112.29 radiation 1 14400 < th dose dependent rect. 3 2
250 112.62 temperature 15 14400 < th dose independent rect. 9 1
253 112.63 humidity 60 43200 < th dose independent rect. 21 15
275 112.80 radiation 40 43200 > th dose dependent rect. 15 17
300 113.04 wind 9 4320 < th dose independent rect. 15 4
325 113.24 radiation 40 43200 < th dose independent rect. 15 5
328 113.25 temperature 15 14400 < th dose independent rect. 2 8
332 113.27 temperature 15 14400 > th dose independent sin 6 NA
333 113.27 radiation 40 43200 < th dose independent rect. 15 1
348 113.33 humidity 60 43200 > th dose independent rect. 18 17
362 113.40 radiation 40 43200 < th dose independent rect. 15 7
380 113.49 radiation 40 43200 < th dose independent rect. 15 16
383 113.51 radiation 10 43200 < th dose independent rect. 18 2
388 113.52 radiation 40 43200 < th dose independent rect. 15 13
389 113.53 radiation 40 43200 < th dose independent rect. 15 11
414 113.66 wind 9 43200 < th dose independent rect. 12 1
424 113.77 radiation 10 43200 < th dose independent rect. 18 4
452 113.93 radiation 10 43200 < th dose independent rect. 18 8
495 114.23 radiation 40 43200 > th dose dependent rect. 15 1
519 114.27 radiation 10 43200 < th dose dependent rect. 18 2
563 114.49 humidity 70 43200 < th dose independent rect. 6 2
567 114.51 radiation 10 43200 < th dose dependent rect. 18 4
572 114.54 temperature 15 14400 > th dose independent rect. 23 1
574 114.54 radiation 10 43200 < th dose dependent rect. 18 8
594 114.64 temperature 20 14400 < th dose dependent rect. 18 1
624 114.81 humidity 70 43200 > th dose independent rect. 6 1
636 114.85 humidity 90 14400 < th dose independent rect. 23 1
658 115.00 radiation 1 43200 > th dose dependent rect. 18 1
700 115.13 wind 9 43200 > th dose independent rect. 12 1
788 115.62 humidity 60 43200 < th dose dependent rect. 10 1
877 116.18 humidity 90 14400 > th dose independent rect. 24 1
906 116.39 temperature 15 14400 < th dose independent sin 7 NA
914 116.45 temperature 15 14400 < th dose independent rect. 23 1
937 116.52 radiation 40 43200 > th dose independent rect. 15 17
969 116.69 humidity 90 14400 < th dose independent rect. 22 3
972 116.71 temperature 20 14400 < th dose independent rect. 6 12
984 116.76 wind 1 43200 < th dose dependent rect. 16 1