Os05g0557400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Membrane attack complex component/perforin/complement C9 family protein.
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Os05g0557400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Membrane attack complex component/perforin/complement C9 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.42 | 0.528 | 7.41 | 0.669 | 1.65 | 4.71 | -0.47 | -1.45 | 0.376 | 8.6 | 10.04 | 692 | 19.3 | 20.3 |
| 127.47 | 0.526 | 7.42 | 0.869 | 1.6 | 4.9 | -0.584 | -- | 0.369 | 8.32 | 8.736 | 693 | 19.3 | 20.4 |
| 126.71 | 0.524 | 7.42 | 0.639 | 1.6 | 4.82 | -- | -1.37 | 0.365 | 8.54 | 9.001 | 687 | 19.3 | 20.5 |
| 128.17 | 0.527 | 7.4 | 0.863 | 1.65 | 5.01 | -- | -- | 0.4 | 8.25 | 8.564 | 688 | 19.4 | 20.4 |
| 146.74 | 0.564 | 7.45 | 0.782 | -- | 5.42 | -- | -0.864 | 0.356 | -- | -2.478 | 704 | 18.5 | 20.4 |
| 351.21 | 0.879 | 7.21 | 1.94 | 2.12 | -- | -0.174 | -- | 1.18 | 10.6 | -- | -- | -- | -- |
| 351.33 | 0.878 | 7.21 | 1.93 | 2.12 | -- | -- | -- | 1.18 | 10.6 | -- | -- | -- | -- |
| 146.52 | 0.564 | 7.43 | 0.96 | -- | 5.32 | -- | -- | 0.423 | -- | -2.258 | 704 | 18.6 | 20.2 |
| 146.22 | 0.563 | 7.4 | -- | 1.68 | 5.3 | -- | -- | 0.296 | 8.12 | 8.613 | 694 | 19.3 | 20.5 |
| 629.46 | 1.17 | 7.27 | 1.89 | -- | -- | -- | -- | 1.17 | -- | -- | -- | -- | -- |
| 449.41 | 0.992 | 7.26 | -- | 2.11 | -- | -- | -- | 0.961 | 10.6 | -- | -- | -- | -- |
| 163.68 | 0.596 | 7.45 | -- | -- | 5.41 | -- | -- | 0.296 | -- | 7.639 | 715 | 19 | 18.7 |
| 723.58 | 1.26 | 7.32 | -- | -- | -- | -- | -- | 0.955 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.15 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 7 | 134.09 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 18 | 137.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 28 | 141.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 33 | 142.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 71 | 143.52 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 13 |
| 100 | 144.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 13 |
| 122 | 144.56 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |
| 155 | 145.12 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 372 | 148.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 401 | 148.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 559 | 150.93 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |