BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0557400 Os05g0557400|AK069566
(628 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613 569 e-162
AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607 506 e-143
AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628 384 e-106
AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562 350 1e-96
>AT1G28380.1 | chr1:9963696-9966060 FORWARD LENGTH=613
Length = 612
Score = 569 bits (1467), Expect = e-162, Method: Compositional matrix adjust.
Identities = 300/590 (50%), Positives = 374/590 (63%), Gaps = 17/590 (2%)
Query: 35 YDLTSDLRLSRVKA---GGRLVDIDGASGAARREXXXXXXXXXXXXXXXXXXDKGERTRF 91
YDL SD+R S K G RLV+ID R+ DKGERTR
Sbjct: 26 YDLCSDVRFSACKTTPDGSRLVEIDPTRN---RDLIFPGGIVVNNVSSSIKCDKGERTRL 82
Query: 92 RSDVLSFAQMAEQVNQTMSVAGKIPSGAFNAMFDYHGCWHKDAAATGSLCFDGRFIELYA 151
RSD+LSF QM+E+ NQ M ++GKIPSG FN MF + CW KDA++ +L +DG FI LY+
Sbjct: 83 RSDILSFNQMSEKFNQDMCLSGKIPSGMFNNMFAFSKCWPKDASSVKTLAYDGWFISLYS 142
Query: 152 VEAPRAHLALLDRVKRDVPPFWDPAALAEFIDKYGTHVIAGVKMGGKDVVCIKQLKGSNL 211
VE R L L D VKR+VP WD AALA FI+KYGTHV+ GV MGGKDV+ +KQ++ SN
Sbjct: 143 VEIVRKQLTLRDEVKREVPSSWDSAALAGFIEKYGTHVVVGVTMGGKDVIHVKQMRKSNH 202
Query: 212 TQSDVQSRLKKLSDDKLAQDSPESLTARDDKFXXXXXXXXXXXXXSAAWRSFRPSVVSH- 270
++Q LK D++ D ES + S +VV H
Sbjct: 203 EPEEIQKMLKHWGDERFCVDPVESKSPASVYSGKPKEENLLQWGLQPFGTSVSSAVVMHT 262
Query: 271 -KDDILSIHIRRGGVDNGQGHSNWLSTISGSPDVISMAFVPITSLLTGVRGCGFLNHAVN 329
++I+ + IRRGGVD GQ H WLST+S +P+VISM FVPITSLL+G+ G GFL+HAVN
Sbjct: 263 KNEEIMRVCIRRGGVDLGQSHERWLSTVSQAPNVISMCFVPITSLLSGLPGTGFLSHAVN 322
Query: 330 LYLRYKPPIEELHQFLEFQVPRQWAPEFGELPLALGPRKKKNSLPSLQFTLMGPKLHVTT 389
LYLRYKPPIEELHQFLEFQ+PRQWAP +G+LPL L R+ K S PSLQF+LMGPKL+V T
Sbjct: 323 LYLRYKPPIEELHQFLEFQLPRQWAPVYGDLPLGL--RRSKQSSPSLQFSLMGPKLYVNT 380
Query: 390 AKADSGNRPVTGIRLFLEGKKNNRLGVHLQHLSATPGTITIAGEVASAEDATVRERDYIE 449
+K DSG RPVTG+R FLEGKK N L +HLQHLSA P ++ ++ + E+ Y
Sbjct: 381 SKVDSGERPVTGLRFFLEGKKGNHLAIHLQHLSACPPSLHLSHDDTYEPIEEPVEKGYYV 440
Query: 450 PIKSPLLSHVCTAPVQYNGARIDDCAAIVTRAWLEVQETCLKKVLFLRLGFSGVASTKIR 509
P+K + SHVCT PVQYNGAR DD A+IVT+AWLEV+ ++KVLFLRLGFS AS R
Sbjct: 441 PVKWGIFSHVCTYPVQYNGARSDDTASIVTKAWLEVKGMGMRKVLFLRLGFSLDASAVTR 500
Query: 510 RSEWDGPFVVSRKXXXXXXXXXXXXXXXXXXXXXQMMQQQQPVGEKVEVNSAIFPKGPPV 569
+S WD SRK Q K+++NSA++P+GP
Sbjct: 501 KSCWDNLSTNSRKSGVFSMISTRLSTGLSPNPATTKPQS------KIDINSAVYPRGPSP 554
Query: 570 PLPVQRMARYVDTTEVMRGPADLPGYWVVTGAKLCIEGGKVALKVKYSLL 619
P+ ++ VDT EVMRGP + PGYWVVTGAKLC+E GK+++K KYSLL
Sbjct: 555 PVK-PKLLSLVDTKEVMRGPEEQPGYWVVTGAKLCVEAGKISIKAKYSLL 603
>AT4G24290.2 | chr4:12594856-12597815 FORWARD LENGTH=607
Length = 606
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/590 (46%), Positives = 352/590 (59%), Gaps = 25/590 (4%)
Query: 35 YDLTSDLRLSRVKAGG---RLVDIDGASGAARREXXXXXXXXXXXXXXXXXXDKGERTRF 91
YDL DLRL K G RL+DI G E DKGER RF
Sbjct: 22 YDLAIDLRLKYCKGGSKDSRLLDI--KEGDDNCEIVLPGGISIPNVSKSIKCDKGERMRF 79
Query: 92 RSDVLSFAQMAEQVNQTMSVAGKIPSGAFNAMFDYHGCWHKDAAATGSLCFDGRFIELYA 151
RSD+L F QMAEQ NQ +S+AGKIPSG FNAMF++ CW KDAA T +L FDG FI LY+
Sbjct: 80 RSDILPFQQMAEQFNQELSLAGKIPSGLFNAMFEFSSCWQKDAAYTKNLAFDGVFISLYS 139
Query: 152 VEAPRAHLALLDRVKRDVPPFWDPAALAEFIDKYGTHVIAGVKMGGKDVVCIKQLKGSNL 211
V ++ + L + VK+ VP WDPAALA FID YGTH+I VKMGGKDV+ KQ S L
Sbjct: 140 VALDKSQVLLREHVKQAVPSTWDPAALARFIDIYGTHIIVSVKMGGKDVIYAKQQHSSKL 199
Query: 212 TQSDVQSRLKKLSDDKLAQDSPESLTARDDKFXXXXXXXXXXXXXSAAWRSFRPSVVSHK 271
D+Q RLK+++D + + S T + A S ++K
Sbjct: 200 QPEDLQKRLKEVADKRFVEASVVHNTGSERVQASSKVETKEQRLRFADTSSL--GSYANK 257
Query: 272 DDILSIHIRRGGVDN-GQGHSNWLSTISGSPDVISMAFVPITSLLTGVRGCGFLNHAVNL 330
+D + + RRGG DN H+ WL T+ PDVISM+F+PITSLL GV G GFL+HA+NL
Sbjct: 258 EDYVFMCKRRGGNDNRNLMHNEWLQTVQMEPDVISMSFIPITSLLNGVPGSGFLSHAINL 317
Query: 331 YLRYKPPIEELHQFLEFQVPRQWAPEFGELPLALGPRKKKNSLPSLQFTLMGPKLHVTTA 390
YLRYKPPIEELHQFLEFQ+PRQWAP F ELP LGP++K+ S SLQF+ GPKL+V T
Sbjct: 318 YLRYKPPIEELHQFLEFQLPRQWAPVFSELP--LGPQRKQQSCASLQFSFFGPKLYVNTT 375
Query: 391 KADSGNRPVTGIRLFLEGKKNNRLGVHLQHLSATPGTITIAGEVASAEDATVRERDYIEP 450
D G RP+TG+RL+LEG+++NRL +HLQHLS+ P + ++ + +R Y E
Sbjct: 376 PVDVGKRPITGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDDLNRSIRQESHDRRYYEK 435
Query: 451 IKSPLLSHVCTAPVQYNGARIDDCAAIVTRAWLEVQETCLKKVLFLRLGFSG-VASTKIR 509
+ SHVCT PV+ DD ++VT A L V+ K VLFLRL FS V +T ++
Sbjct: 436 VNWKNYSHVCTEPVES-----DDDLSVVTGAQLHVESHGFKNVLFLRLCFSRVVGATLVK 490
Query: 510 RSEWDGPFVVSRKXXXXXXXXXXXXXXXXXXXXXQMMQQQQPVGEKVEVNSAIFPKGPPV 569
SEWD + K Q+ P V +NSAI+P GPPV
Sbjct: 491 NSEWDEAVGFAPKSGLISTLISHHFTAA---------QKPPPRPADVNINSAIYPGGPPV 541
Query: 570 PLPVQRMARYVDTTEVMRGPADLPGYWVVTGAKLCIEGGKVALKVKYSLL 619
P ++ ++VDT+E+ RGP + PGYWVV+GA+L +E GK++LKVKYSL
Sbjct: 542 PTQAPKLLKFVDTSEMTRGPQESPGYWVVSGARLLVEKGKISLKVKYSLF 591
>AT1G14780.1 | chr1:5091020-5093873 FORWARD LENGTH=628
Length = 627
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 238/629 (37%), Positives = 323/629 (51%), Gaps = 74/629 (11%)
Query: 35 YDLTSDLRLSRVKAGGRLVDIDGASGAAR---------REXXXXXXXXXXXXXXXXXXDK 85
+DLT+D RL K G DG++G R RE DK
Sbjct: 20 FDLTADFRLKYCKDG------DGSAGDDRLVVLDQTQNRELHIPGFGVFQNVSADINCDK 73
Query: 86 GERTRFRSDVLSFAQMAEQVNQTMSVAGKIPSGAFNAMFDYH-GCWHKDAAATGSLCFDG 144
GERTRFRSD+L F +M+E NQ SV GKIPSG FNA F + G W DAA SL D
Sbjct: 74 GERTRFRSDILDFNKMSEYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANVKSLGLDA 133
Query: 145 RFIELYAVEAPRAH-LALLDRVKRDVPPFWDPAALAEFIDKYGTHVIAGVKMGGKDVVCI 203
+ L+ + + L L DRV+ VP WDP LA FI++YGTHVI GV +GG+DVV +
Sbjct: 134 SVVTLFNLHIHNPNRLRLTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGGQDVVVV 193
Query: 204 KQLKGSNLTQSDVQSRLKKLSD--------------DKLAQDS------PESLTARDDKF 243
+Q K S+L ++ L L D +K S PE+ DDK
Sbjct: 194 RQDKSSDLDNDLLRHHLYDLGDQLFTGSCLLSTRRLNKAYHHSHSQPKFPEAFNVFDDK- 252
Query: 244 XXXXXXXXXXXXXSAAWRSFRPSVVSHKDDILSIHIRRGGVDNGQGHSNWLSTISGSPDV 303
+ A+ +F ++ ++ I I +RGG + HS WL T+ PD
Sbjct: 253 ------------QTVAFNNFS---INSQNGITVICAKRGGDGRAKSHSEWLITVPDKPDA 297
Query: 304 ISMAFVPITSLLTGVRGCGFLNHAVNLYLRYKPPIEELHQFLEFQVPRQWAPEFGELPLA 363
I+ F+PITSLL V G G L+HA++LYLRYKPP+ +L FL+F PR WAP +LP
Sbjct: 298 INFNFIPITSLLKDVPGSGLLSHAMSLYLRYKPPLMDLQYFLDFSGPRAWAPVHNDLPFG 357
Query: 364 LGPRKKKNSLPSLQFTLMGPKLHVTTAKADSGNRPVTGIRLFLEGKKNNRLGVHLQHLSA 423
P ++ P+L MGPKL+V T S PVTG+R FLEGKK NRL +HLQHL
Sbjct: 358 AAP-NMASAYPALHINFMGPKLYVNTTPVTSEKNPVTGMRFFLEGKKCNRLAIHLQHLDN 416
Query: 424 TPGTI--TIAGE-VASAEDATVRERDYIEPIKSPLLSHVCTAPVQY---------NGARI 471
T T+ I E + D Y EP+ SHVCT PV+Y N
Sbjct: 417 TRTTVGEKITDEHIWRGSDQITDNDRYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQ 476
Query: 472 DDCAAIVTRAWLEVQETCLKKVLFLRLGFSGVASTKIRRSEW-DGPFVVSRKXXXXXXXX 530
+D A IVT A LEV++ K VL LRL ++ V+ + ++ W GP S+K
Sbjct: 477 NDVAFIVTGAQLEVKKHGSKSVLHLRLRYTKVSDHYVVQNSWVHGPIGTSQK---SGIFS 533
Query: 531 XXXXXXXXXXXXXQMMQQQQPVGEKVEVNSAIFPKGPPVPLPVQRMARYVDTTEVMRGPA 590
M+Q+ + +V ++S +FP GPPVP ++ ++VD +++ RGP
Sbjct: 534 SMSMPLTSGSVHHNMIQKDK---NEVVLDSGVFPGGPPVPAN-NKIVKFVDLSQLCRGPQ 589
Query: 591 DLPGYWVVTGAKLCIEGGKVALKVKYSLL 619
PG+W+VTG +L ++ GK+ L VK++LL
Sbjct: 590 HSPGHWLVTGVRLYLDKGKLCLHVKFALL 618
>AT1G29690.1 | chr1:10379310-10381861 REVERSE LENGTH=562
Length = 561
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 221/603 (36%), Positives = 307/603 (50%), Gaps = 93/603 (15%)
Query: 35 YDLTSDLRLSRVKA--GGRLVDIDGASGAARREXXXXXXXXXXXXXXXXXXDKGERTRFR 92
+D+TSD+RL K G RLV I+ R+ +G R
Sbjct: 32 FDVTSDVRLLYCKGAPGSRLVRIEEGQ---NRDLELSHGFLLPNVPADIDCSRGNSGTQR 88
Query: 93 SDVLSFAQMAEQVNQTMSVAGKIPSGAFNAMFDYHGCWHKDAAATGSLCFDGRFIELYAV 152
V SF +MAE+ N V G IP G FNAMF+Y G W DAA+T SL G FI LY V
Sbjct: 89 ISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKSLALVGYFIPLYDV 148
Query: 153 EAPRAHLALLDRVKRDVPPFWDPAALAEFIDKYGTHVIAGVKMGGKDVVCIKQLKGSNLT 212
+ + L L + ++R VP WDPA+LA FI+ YGTH++ V +GG+DVV I+Q + S L
Sbjct: 149 KLAKLTLVLHNEIRRAVPSSWDPASLASFIENYGTHIVTSVTIGGRDVVYIRQHQSSPLP 208
Query: 213 QSDVQSRLKKLSDDKLAQDSPESLTARDDKFXXXXXXXXXXXXXSAAWRSFRPSVVSHKD 272
S++++ + + + + +S+T + +KD
Sbjct: 209 VSEIENYVNDMIKHRFHEAESQSITGP----------------------------LKYKD 240
Query: 273 -DILSIHIRRGGVDNGQGHSNWLSTISGSPDVISMAFVPITSLLTGVRGCGFLNHAVNLY 331
DI I RRGG D Q H+ W T+ +PD+I+M F PI SLL GV G L A+ LY
Sbjct: 241 KDITVIFRRRGGDDLEQSHARWAETVPAAPDIINMTFTPIVSLLEGVPGLRHLTRAIELY 300
Query: 332 LRYKPPIEELHQFLEFQVPRQWAPEFGELPLALGPRKKKNSLPSLQFTLMGPKLHVTTAK 391
L YKPPIE+L FL++Q+ R WAPE L ++K+ SLQF+LMGPKL ++ +
Sbjct: 301 LEYKPPIEDLQYFLDYQIARAWAPEQSNL------QRKEPVCSSLQFSLMGPKLFISADQ 354
Query: 392 ADSGNRPVTGIRLFLEGKKNNRLGVHLQHLSATPGTITIAGE----VASAEDATVRERD- 446
G +PVTG+RL LEG K NRL +HLQHL + P + + + + + E+D
Sbjct: 355 VTVGRKPVTGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVPIGAPKWQGPEEQDS 414
Query: 447 -YIEPIKSPLLSHVCTAPVQYNGARIDDCAA--IVTRAWLEVQETCLKKVLFLRLGFSGV 503
+ EPIK SHV T+P+++ I D + IVT A L V + K VL L+L FS V
Sbjct: 415 RWFEPIKWKNFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGVWDFGSKNVLHLKLLFSKV 474
Query: 504 ASTKIRRSEWDGPFVVSRKXXXXXXXXXXXXXXXXXXXXXQMMQQQQPVGEKVEVNSAIF 563
IRRS WD V S + +
Sbjct: 475 PGCTIRRSVWDHTPVAS--------------------------------------SGRLE 496
Query: 564 PKGPPVPLPVQ-------RMARYVDTTEVMRGPADLPGYWVVTGAKLCIEGGKVALKVKY 616
P GP + ++A+ VD++E+++GP DLPG+W+VTGAKL +E GK+ L+VKY
Sbjct: 497 PGGPSTSSSTEEVSGQSGKLAKIVDSSEMLKGPQDLPGHWLVTGAKLGVEKGKIVLRVKY 556
Query: 617 SLL 619
SLL
Sbjct: 557 SLL 559
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,998,080
Number of extensions: 482903
Number of successful extensions: 1077
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1056
Number of HSP's successfully gapped: 6
Length of query: 628
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 523
Effective length of database: 8,227,889
Effective search space: 4303185947
Effective search space used: 4303185947
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)