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Os05g0555100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Protein phosphatase 2A B'kappa subunit.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.11 (0.0597) R2 : 0.5
β1 : -2.72 (0.219) R2dD : 0.177 R2D : 0.056
β2 : 1.73 (0.154) R2dC : 0.163 R2C : -0.0354
β3 : 2.92 (0.185) R2dE : 0.323 R2E : 0.0451
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.35 (0.128) R2dN8 : 0.165 R2N8 : 0.0411
σ : 1.11
deviance : 572.81
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C
peak time of C : 13.1
E
wheather : humidity
threshold : 70.5
memory length : 1148
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 9.34
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
561.27 1.11 7.08 -2.39 1.67 2.77 0.989 2.59 -1.29 13 70.06 1166 9.47 --
572.46 1.11 7.1 -2.64 1.72 2.93 0.381 -- -1.34 12.9 70.35 1150 9.61 --
564.74 1.11 7.08 -2.41 1.66 2.78 -- 2.17 -1.28 13.2 70.07 1165 9.21 --
572.81 1.11 7.11 -2.72 1.73 2.92 -- -- -1.35 13.1 70.5 1148 9.34 --
655.3 1.19 7.13 -2.16 -- 2.51 -- 2.62 -1.41 -- 71 1493 9.35 --
881.7 1.39 7.06 -2.41 0.846 -- 0.315 -- -1.15 11.8 -- -- -- --
882.07 1.39 7.06 -2.4 0.845 -- -- -- -1.15 12 -- -- -- --
668.99 1.2 7.16 -2.6 -- 2.62 -- -- -1.52 -- 71.35 1491 9.94 --
760.29 1.28 7.05 -- 1.68 2.77 -- -- -1.08 13.1 71.02 1149 9.36 --
927.03 1.42 7.08 -2.42 -- -- -- -- -1.16 -- -- -- -- --
1033.46 1.5 7 -- 0.876 -- -- -- -0.883 12.1 -- -- -- --
840.09 1.35 7.05 -- -- 2.59 -- -- -1.09 -- 72 1510 7.72 --
1081.84 1.54 7.02 -- -- -- -- -- -0.892 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 598.07 temperature 30 14400 > th dose dependent rect. 14 5
17 598.77 temperature 30 14400 > th dose dependent sin 13 NA
18 599.10 temperature 30 14400 > th dose dependent rect. 14 2
55 600.04 temperature 30 14400 > th dose independent rect. 14 5
69 600.08 temperature 30 14400 < th dose independent rect. 14 17
72 600.11 temperature 30 14400 < th dose independent rect. 14 5
73 600.14 temperature 30 14400 < th dose independent rect. 14 8
76 600.14 temperature 30 14400 < th dose independent rect. 14 15
81 600.17 temperature 30 14400 < th dose independent rect. 14 13
102 600.71 temperature 30 14400 > th dose independent sin 14 NA
116 600.84 temperature 30 14400 < th dose independent sin 14 NA
179 602.14 temperature 30 14400 > th dose independent rect. 11 8
208 602.26 temperature 30 14400 < th dose independent rect. 11 20
211 602.28 temperature 30 14400 < th dose independent rect. 11 8
214 602.30 temperature 30 14400 < th dose independent rect. 11 11
217 602.30 temperature 30 14400 < th dose independent rect. 11 18
221 602.32 temperature 30 14400 < th dose independent rect. 11 16
273 602.73 temperature 25 1440 > th dose dependent rect. 13 1
274 602.77 temperature 30 14400 < th dose independent rect. 16 1
286 602.85 temperature 30 14400 < th dose independent rect. 14 22
317 603.51 temperature 30 14400 > th dose independent rect. 14 22
377 603.99 temperature 30 14400 < th dose independent rect. 18 23
394 604.39 temperature 30 14400 < th dose independent rect. 2 17
397 604.40 temperature 30 14400 < th dose independent rect. 2 20
400 604.41 temperature 30 14400 < th dose independent rect. 4 15
403 604.41 temperature 30 14400 < th dose independent rect. 21 22
404 604.42 temperature 30 14400 < th dose independent rect. 6 13
406 604.42 temperature 30 14400 < th dose independent rect. 4 18
421 604.43 temperature 30 14400 < th dose independent rect. 6 16
428 604.43 temperature 30 14400 < th dose independent rect. 4 23
429 604.43 temperature 30 14400 < th dose independent rect. 6 23
432 604.44 temperature 30 14400 < th dose independent no NA NA
452 604.45 temperature 30 14400 < th dose independent rect. 6 21
492 604.55 temperature 30 14400 > th dose independent rect. 18 23
498 604.64 temperature 25 1440 > th dose dependent rect. 13 6
509 604.71 temperature 30 14400 > th dose independent no NA NA
607 604.77 humidity 70 14400 < th dose independent rect. 18 2
625 604.82 temperature 25 1440 > th dose dependent sin 21 NA
628 604.94 temperature 25 1440 > th dose dependent rect. 6 13
633 605.02 temperature 25 1440 > th dose dependent rect. 6 17
684 605.43 temperature 25 1440 > th dose dependent rect. 13 4
716 605.53 temperature 25 14400 > th dose dependent rect. 18 2
764 605.75 humidity 70 14400 < th dose independent rect. 18 13
766 605.76 temperature 25 1440 > th dose dependent rect. 11 8
770 605.77 temperature 25 1440 > th dose dependent rect. 11 12
789 605.92 temperature 25 1440 > th dose dependent rect. 13 21
797 606.03 humidity 50 720 > th dose dependent rect. 16 7
828 606.22 humidity 80 1440 < th dose dependent rect. 11 22
839 606.29 humidity 70 14400 < th dose independent rect. 18 4
874 606.42 humidity 50 1440 > th dose dependent rect. 10 11
894 606.48 humidity 80 1440 < th dose dependent sin 16 NA
916 606.60 humidity 70 1440 < th dose independent sin 15 NA
919 606.61 temperature 30 14400 > th dose dependent no NA NA