Os05g0552400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os05g0552400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.18 | 0.391 | 2.05 | 5.15 | 0.0523 | -70.6 | -0.164 | 431 | 0.193 | 12.6 | 994.8 | 681 | -- | -- |
| 84 | 0.43 | 2.89 | 0.131 | 0.0156 | -0.0312 | -0.263 | -- | 0.183 | 11.2 | 994.8 | 681 | -- | -- |
| 68.38 | 0.385 | 2.09 | 4.88 | 0.0543 | -71.2 | -- | 435 | 0.191 | 13.6 | 994.7 | 672 | -- | -- |
| 81.43 | 0.42 | 2.89 | 0.103 | 0.0335 | 0.748 | -- | -- | 0.189 | 11.4 | 994.5 | 594 | -- | -- |
| 68.4 | 0.385 | 2.08 | 4.95 | -- | -73.4 | -- | 448 | 0.184 | -- | 994.6 | 669 | -- | -- |
| 84 | 0.43 | 2.89 | 0.131 | 0.0155 | -- | -0.263 | -- | 0.183 | 11.2 | -- | -- | -- | -- |
| 84.29 | 0.43 | 2.89 | 0.121 | 0.0214 | -- | -- | -- | 0.182 | 13.9 | -- | -- | -- | -- |
| 81.51 | 0.42 | 2.89 | 0.1 | -- | 0.755 | -- | -- | 0.19 | -- | 994.6 | 606 | -- | -- |
| 81.68 | 0.421 | 2.89 | -- | 0.039 | 0.783 | -- | -- | 0.179 | 11.3 | 994.7 | 617 | -- | -- |
| 84.31 | 0.429 | 2.89 | 0.12 | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
| 84.67 | 0.43 | 2.89 | -- | 0.0192 | -- | -- | -- | 0.169 | 13.8 | -- | -- | -- | -- |
| 81.78 | 0.421 | 2.89 | -- | -- | 0.77 | -- | -- | 0.179 | -- | 994.7 | 619 | -- | -- |
| 84.7 | 0.43 | 2.89 | -- | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.65 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 68.11 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 1 | 1 |
| 7 | 68.11 | atmosphere | 995 | 720 | < th | dose independent | rect. | 14 | 1 |
| 50 | 68.11 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 55 | 68.11 | atmosphere | 995 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 101 | 68.15 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 1 |
| 115 | 68.60 | atmosphere | 995 | 720 | > th | dose independent | sin | 6 | NA |
| 120 | 69.02 | atmosphere | 995 | 720 | < th | dose independent | sin | 6 | NA |
| 128 | 69.73 | atmosphere | 995 | 720 | < th | dose dependent | sin | 7 | NA |
| 238 | 72.78 | atmosphere | 995 | 720 | > th | dose independent | no | NA | NA |
| 251 | 73.32 | atmosphere | 995 | 720 | < th | dose independent | no | NA | NA |
| 470 | 73.69 | atmosphere | 995 | 720 | < th | dose dependent | no | NA | NA |
| 777 | 76.39 | temperature | 25 | 270 | > th | dose dependent | rect. | 22 | 4 |