BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0552400 Os05g0552400|AK107568
(252 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260 154 4e-38
AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260 145 1e-35
AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289 122 3e-28
AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308 116 1e-26
AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222 115 2e-26
AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266 112 2e-25
AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219 100 8e-22
AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276 99 2e-21
AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861 60 8e-10
AT2G45530.1 | chr2:18756604-18757326 FORWARD LENGTH=241 56 2e-08
AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109 52 2e-07
AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467 52 4e-07
AT3G09760.1 | chr3:2992975-2995451 REVERSE LENGTH=492 50 1e-06
AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495 50 1e-06
AT5G18760.1 | chr5:6258508-6260828 REVERSE LENGTH=412 50 1e-06
AT2G22120.2 | chr2:9394026-9396979 FORWARD LENGTH=364 49 3e-06
AT3G06330.1 | chr3:1917334-1919709 FORWARD LENGTH=427 48 5e-06
AT2G37950.1 | chr2:15882536-15883665 REVERSE LENGTH=208 47 8e-06
>AT2G01275.1 | chr2:142610-143809 REVERSE LENGTH=260
Length = 259
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 117/218 (53%), Gaps = 10/218 (4%)
Query: 1 MADHFAVMAGRLLTESTVQSAIDEASAAAMPSSVIASEHNDVQDE------REKSGVLVE 54
M DHF ++ RL+TEST+++AI S M + I E + D+ R + E
Sbjct: 1 MGDHFVLLVDRLITESTIEAAIQ--SRNQMLQANIPVEECTILDDKTLEMLRNGDLSMAE 58
Query: 55 CRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTPNYTAPAKL 114
CRIC +ED + METPCSC GS+KYAHR+C+QRWC+EKGDT CEIC Q++ P+YTAP L
Sbjct: 59 CRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDYTAPPPL 118
Query: 115 FQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPELP--NPKGVIYCRIVAXXXXXXX 172
+ G + FR I + + A ST D P + I CR +
Sbjct: 119 LELGHVPLHFRGNWGISQREHRFITVVPADSTFIDQPYPLSSTTSFICCRSLVLIFMALL 178
Query: 173 XXHDAISVFLGDHDAYTVAMITLLMLRTAGIVIPVYII 210
+ + L + + + TLL LR GI++P+Y++
Sbjct: 179 ILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVV 216
>AT5G38070.1 | chr5:15190254-15191588 FORWARD LENGTH=260
Length = 259
Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 1 MADHFAVMAGRLLTESTVQSAIDEASAAAMPSSVIASEHNDVQDEREKSGV------LVE 54
M DH ++ RL ++S + ++ A A S + D E +G V+
Sbjct: 1 MGDHLVLVVDRLSSDSGL-GTVNRADPKA------DSVNEDGVSESISAGADLCESKFVQ 53
Query: 55 CRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTPNYTAPAKL 114
CRIC +ED+ T M+TPCSC G+LK+AH C+QRWC+EKGDT+CEIC QQY P YTAP +L
Sbjct: 54 CRICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQL 113
Query: 115 FQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPEL---PNPKGVIYCRIVAXXXXXX 171
F + S+ F + I+ ++N D +L +P +I CR++A
Sbjct: 114 FHYTGISMNFGSDWGIEGLDLRNPYFLTWGDADDDHDLYSFHSPTSLICCRLIALLFVLL 173
Query: 172 XXXHDAISVFLGDHDAYTVAMITLLMLRTAGIVIPVYIILLSLTELLHRRNQRQ 225
++ V LG D +++ ++ L ++RT GI++ Y+ S + R +R
Sbjct: 174 LFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCRQERD 227
>AT3G47550.3 | chr3:17523841-17525278 FORWARD LENGTH=289
Length = 288
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 118/250 (47%), Gaps = 28/250 (11%)
Query: 1 MADHFAVMAGRLLTESTVQSAIDEASA--------------AAMPSSVIASEHNDVQDER 46
MADH ++ RL+T ++ S D S+ +++ + + E+ V DE
Sbjct: 1 MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVADEE 60
Query: 47 EKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTP 106
E VECRICQEED +E PC+C GSLKYAHRKC+QRWC+EKGD CEIC Q Y
Sbjct: 61 EPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120
Query: 107 NYTAPAKLFQHGRNSIFFRTPGYIQAQVMQNTDRSAAA---------STSYDP-ELPNPK 156
YTAP +I + + TD A YD N
Sbjct: 121 GYTAPPPPPPD--ETIIHIGDDWENGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSS 178
Query: 157 GVIYCRIVAXXXXXXXXXHDAISVFLG-DHDAYTVAMITLLMLRTAGIVIPVYIILLSLT 215
G +CR A DA+++ D + A +L +LR AG ++P YI+ ++
Sbjct: 179 GAAFCRSAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAIG 238
Query: 216 ELLHRRNQRQ 225
+L RR QRQ
Sbjct: 239 -ILQRRRQRQ 247
>AT5G62460.1 | chr5:25075545-25077072 FORWARD LENGTH=308
Length = 307
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 41 DVQDEREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEIC 100
DV DE E VECRICQEED +E+PCSC GSLKYAHRKC+QRWC+EKGDT CEIC
Sbjct: 64 DVDDEEEPLIQSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTCEIC 123
Query: 101 LQQYTPNYTAPA---------KLFQHGRNSIF--FRTPGYIQAQVMQNTDRSAAASTSYD 149
+ Y P YTAP + + N + P + M +R + +
Sbjct: 124 HKSYQPGYTAPPPPPADDTIIDIGEDWGNGVHLDLNDPRIL---AMAAAERHFFDADYDE 180
Query: 150 PELPNPKGVIYCR---IVAXXXXXXXXXHDAISVFLGDHDAYTVAMITLLMLRTAGIVIP 206
N G +CR ++ + + D + A L MLR AG ++P
Sbjct: 181 YADSNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGFLLP 240
Query: 207 VYIILLSLTELLHRRNQRQ 225
YI+ +++ +L RR QRQ
Sbjct: 241 CYIMAWAIS-ILQRRRQRQ 258
>AT1G02610.1 | chr1:553181-555854 REVERSE LENGTH=222
Length = 221
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 44 DEREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQ 103
DE CRIC EE+ ++Y E PCSC G++K+AHR CIQRWCDEKG+TICEICLQ+
Sbjct: 9 DETYLKSSFNRCRICHEEEAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQE 68
Query: 104 YTPNYTAPAKLFQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPELPN-----PKGV 158
Y P YT +K + ++ R +I + R+ + + +G
Sbjct: 69 YKPGYTTTSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNREESDFQECNSGVDRGA 128
Query: 159 IYCRIVAXXXXXXXXXHDAISVFLGDHDAYTVAMITLLMLRTAGIVIPVYIILLSLTEL 217
CR +A A G + Y + T+L L+ GI++P+ +I+ ++T +
Sbjct: 129 SCCRYLALIFSVILLIKHAFDAVYGTEE-YPYTIFTVLTLKAIGILLPMLVIIRTITAI 186
>AT1G14260.1 | chr1:4873200-4874430 FORWARD LENGTH=266
Length = 265
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 40 NDVQDEREKSGVL--VECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTIC 97
D + E+ ++ ECRICQ+E D +E+PC+C GSLKYAHRKC+QRWC+EKG+TIC
Sbjct: 40 GDTTENEEEDSLISSAECRICQDECDIKNLESPCACNGSLKYAHRKCVQRWCNEKGNTIC 99
Query: 98 EICLQQYTPNYTAPAKLFQHGRNSI----FFRTPGY----IQAQVMQNTDRSAAASTSYD 149
EIC Q Y YT+P Q +I +R G + + +R S D
Sbjct: 100 EICHQPYQAGYTSPPPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDD 159
Query: 150 PELPNPKGVIYCRIVAXXXXXXXXXHDAISV--FLGDHDAYTVAMITLLMLRTAGIVIPV 207
+ G + R A A+++ + D ++++L +LR A ++P
Sbjct: 160 YTASDTSGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPC 219
Query: 208 YIILLSLTELLHRRNQRQ 225
Y I+ S +LHRR QRQ
Sbjct: 220 Y-IMASAISILHRRRQRQ 236
>AT4G02075.1 | chr4:913555-916414 REVERSE LENGTH=219
Length = 218
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 6/183 (3%)
Query: 44 DEREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQ 103
D+ + + CRIC EE+++++ E PC+C G++K+AHR CIQRWC+EKG+T CEICLQ
Sbjct: 9 DDTKSKVRITRCRICHEEEEESFFEVPCACSGTVKFAHRNCIQRWCNEKGNTTCEICLQV 68
Query: 104 YTPNYTAPAKLFQHGRNSIFFRTPGYIQAQVMQNTDRSAAASTSYDPELPNPKGVIYCRI 163
Y YTA K + + R G + + + S A S +G +CR
Sbjct: 69 YKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLV--SIAESDISQCNSVADRGASFCRS 126
Query: 164 VAXXXXXXXXXHDAISVFLGDHDAYTVAMITLLMLRTAGIVIPVYIILLSLTEL---LHR 220
+ V G + Y ++ T+L L+ GI++P++II+ +++ + L R
Sbjct: 127 LTFTLSVFLLMKHTFDVIYGTEE-YPFSVFTVLTLKAIGILLPMFIIIRTISTIQKTLRR 185
Query: 221 RNQ 223
R+Q
Sbjct: 186 RHQ 188
>AT2G02960.5 | chr2:862440-863980 REVERSE LENGTH=276
Length = 275
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 52/78 (66%)
Query: 45 EREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQY 104
E E V ECRIC +E +E+PC+C GSLKYAHRKC+QRWC+EKG+ ICEIC Q Y
Sbjct: 33 ENEPLIVSGECRICSDESPVENLESPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPY 92
Query: 105 TPNYTAPAKLFQHGRNSI 122
P YTAP Q +I
Sbjct: 93 QPGYTAPPPPLQPEETTI 110
>AT4G32670.1 | chr4:15759527-15762847 REVERSE LENGTH=861
Length = 860
Score = 60.5 bits (145), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 55 CRICQE-EDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYT--PNYT-- 109
CRICQ E+ + PC+CRGSLKY H C+ W + + CEIC + Y+ P Y+
Sbjct: 33 CRICQSPEEPDNPLRHPCACRGSLKYIHSDCLFLWLNRRKRNHCEICKRSYSIVPVYSEN 92
Query: 110 APAKLFQH 117
AP +L H
Sbjct: 93 APERLPWH 100
>AT2G45530.1 | chr2:18756604-18757326 FORWARD LENGTH=241
Length = 240
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 54 ECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTPNYTAPAK 113
+CR+C ++ ++ +E C CRG L AHR CI W KG CEIC Q N T P
Sbjct: 73 QCRVCLQDKEEVLIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEIC-QVVAVNVTPPET 131
Query: 114 LFQHGRNSIFFRT-PGYIQAQ 133
Q N +R P Y Q +
Sbjct: 132 --QPTTNYWVWRIDPSYRQEE 150
>AT4G34100.1 | chr4:16330590-16334864 FORWARD LENGTH=1109
Length = 1108
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 55 CRICQEEDD-QTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQ--QYTPNY--T 109
CRIC+ D + PC+C GS+K+ H+ C+ +W + CE+C ++P Y
Sbjct: 68 CRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYADN 127
Query: 110 APAKL-FQ 116
AP++L FQ
Sbjct: 128 APSRLPFQ 135
>AT5G03180.2 | chr5:754201-756411 REVERSE LENGTH=467
Length = 466
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 36 ASEHNDVQDEREKSGVLVE-----CRIC--QEEDDQTYMETPCSCRGSLKYAHRKCIQRW 88
AS+ + + DE + G V CRIC + E+D+ + C C+G L AH+ C +W
Sbjct: 227 ASKLSKLHDENDDGGEDVPEEEAVCRICMVEMEEDEEAFKMECMCKGELALAHKTCTIKW 286
Query: 89 CDEKGDTICEICLQQ 103
KG+ C++C Q+
Sbjct: 287 FTIKGNITCDVCKQE 301
>AT3G09760.1 | chr3:2992975-2995451 REVERSE LENGTH=492
Length = 491
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 55 CRICQEE--DDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQYTPNYTAPA 112
CRIC E +D + C CRG L AH++C +W KG+ C++C Q+ N
Sbjct: 266 CRICLVELGEDSEAFKMECLCRGELALAHKECTIKWFTIKGNRTCDVCKQEVQ-NLPVTL 324
Query: 113 KLFQHGRNSI 122
Q+ R SI
Sbjct: 325 LRMQNSRGSI 334
>AT5G60580.2 | chr5:24354298-24356706 FORWARD LENGTH=495
Length = 494
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 41 DVQDEREKSGVLVECRICQEE--DDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICE 98
D +D E V CRIC E + ++ CSC+G L AH+ C +W KG+ CE
Sbjct: 246 DGEDIPEDEAV---CRICLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCE 302
Query: 99 ICLQQ 103
+C Q+
Sbjct: 303 VCKQE 307
>AT5G18760.1 | chr5:6258508-6260828 REVERSE LENGTH=412
Length = 411
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 55 CRICQ---EEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQQ 103
CRIC EE + ME CSC+G L+ H C +W KG IC++C Q+
Sbjct: 203 CRICLDVCEEGNTLKME--CSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQE 252
>AT2G22120.2 | chr2:9394026-9396979 FORWARD LENGTH=364
Length = 363
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 24 EASAAAMPSSVIASEHNDVQDEREKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRK 83
E S PS ++ E +++ E G ++CRIC E D + ++ PC C+G+ KY HR
Sbjct: 6 ELSPLVPPSPMV--EPSEIDLEAGGPGEQIQCRICLETDGRDFI-APCKCKGTSKYVHRD 62
Query: 84 CIQRW 88
C+ W
Sbjct: 63 CLDHW 67
>AT3G06330.1 | chr3:1917334-1919709 FORWARD LENGTH=427
Length = 426
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 55 CRICQ---EEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEICLQ 102
CRIC EE + ME CSC+G L+ H C +W KG C++C Q
Sbjct: 218 CRICLDVCEEGNTLKME--CSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQ 266
>AT2G37950.1 | chr2:15882536-15883665 REVERSE LENGTH=208
Length = 207
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 54 ECRICQ---EEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGDTICEIC 100
+CRIC E +E CSC+ L AHR+C + W KGD CEIC
Sbjct: 83 DCRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEIC 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,037,977
Number of extensions: 197513
Number of successful extensions: 555
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 548
Number of HSP's successfully gapped: 19
Length of query: 252
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 156
Effective length of database: 8,474,633
Effective search space: 1322042748
Effective search space used: 1322042748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)