Os05g0552200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os05g0552200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.42 | 0.439 | 11.3 | 0.435 | 0.768 | -0.767 | 0.251 | 0.767 | 0.48 | 8.72 | 20 | 45 | -- | -- |
| 89.26 | 0.44 | 11.3 | 0.414 | 0.775 | -0.761 | 0.728 | -- | 0.483 | 8.79 | 20.03 | 46 | -- | -- |
| 87.48 | 0.436 | 11.3 | 0.445 | 0.765 | -0.773 | -- | 0.897 | 0.484 | 8.73 | 20.02 | 46 | -- | -- |
| 90.83 | 0.444 | 11.3 | 0.461 | 0.772 | -0.767 | -- | -- | 0.474 | 8.8 | 20.03 | 49 | -- | -- |
| 108.39 | 0.485 | 11.3 | 0.629 | -- | -0.766 | -- | 0.856 | 0.538 | -- | 20.01 | 738 | -- | -- |
| 109.2 | 0.49 | 11.3 | 0.365 | 0.635 | -- | 0.279 | -- | 0.438 | 5.83 | -- | -- | -- | -- |
| 109.39 | 0.49 | 11.3 | 0.367 | 0.637 | -- | -- | -- | 0.437 | 5.76 | -- | -- | -- | -- |
| 104.15 | 0.475 | 11.3 | 0.497 | -- | -0.83 | -- | -- | 0.526 | -- | 10 | 732 | -- | -- |
| 96.56 | 0.458 | 11.3 | -- | 0.761 | -0.728 | -- | -- | 0.417 | 8.61 | 20.02 | 50 | -- | -- |
| 130.43 | 0.534 | 11.3 | 0.386 | -- | -- | -- | -- | 0.452 | -- | -- | -- | -- | -- |
| 112.93 | 0.497 | 11.3 | -- | 0.643 | -- | -- | -- | 0.396 | 5.74 | -- | -- | -- | -- |
| 108.52 | 0.485 | 11.3 | -- | -- | -0.869 | -- | -- | 0.497 | -- | 4.34 | 706 | -- | -- |
| 134.37 | 0.541 | 11.3 | -- | -- | -- | -- | -- | 0.409 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.14 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 14 | 16 |
| 3 | 84.87 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 8 |
| 4 | 84.92 | humidity | 70 | 90 | > th | dose dependent | sin | 3 | NA |
| 5 | 84.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 7 | 85.03 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 11 | 20 |
| 9 | 85.20 | temperature | 10 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 10 | 85.21 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 11 | 23 |
| 11 | 85.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 12 | 85.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 9 |
| 16 | 85.41 | wind | 1 | 14400 | < th | dose dependent | rect. | 9 | 4 |
| 18 | 85.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 21 | 85.56 | radiation | 10 | 270 | > th | dose independent | sin | 7 | NA |
| 49 | 86.20 | radiation | 10 | 90 | > th | dose independent | sin | 2 | NA |
| 59 | 86.47 | humidity | 80 | 90 | < th | dose independent | sin | 4 | NA |
| 60 | 86.47 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 64 | 86.55 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 65 | 86.56 | humidity | 80 | 90 | > th | dose independent | sin | 4 | NA |
| 89 | 86.86 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 92 | 86.95 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 93 | 86.97 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 102 | 87.04 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 15 | 17 |
| 105 | 87.06 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 106 | 87.07 | wind | 9 | 14400 | > th | dose independent | rect. | 1 | 17 |
| 114 | 87.10 | humidity | 80 | 90 | < th | dose independent | rect. | 7 | 8 |
| 116 | 87.11 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 118 | 87.12 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 131 | 87.19 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 12 |
| 133 | 87.21 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 21 |
| 134 | 87.21 | wind | 9 | 14400 | > th | dose dependent | sin | 0 | NA |
| 136 | 87.21 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 21 |
| 137 | 87.22 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 141 | 87.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 15 |
| 147 | 87.25 | wind | 9 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 150 | 87.26 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 155 | 87.27 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 157 | 87.29 | wind | 9 | 14400 | > th | dose independent | sin | 23 | NA |
| 176 | 87.35 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 8 |
| 216 | 87.46 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 223 | 87.48 | humidity | 80 | 90 | < th | dose independent | rect. | 23 | 16 |
| 251 | 87.54 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 255 | 87.57 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 286 | 87.68 | humidity | 80 | 90 | < th | dose independent | rect. | 1 | 14 |
| 288 | 87.68 | radiation | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 297 | 87.72 | radiation | 10 | 90 | > th | dose independent | rect. | 16 | 23 |
| 330 | 87.83 | wind | 9 | 14400 | < th | dose independent | sin | 0 | NA |
| 382 | 87.99 | temperature | 25 | 90 | > th | dose dependent | sin | 5 | NA |
| 384 | 87.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 20 |
| 385 | 88.00 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 415 | 88.06 | humidity | 70 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 448 | 88.13 | humidity | 90 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 455 | 88.14 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 1 | 18 |
| 487 | 88.24 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 5 |
| 508 | 88.26 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 528 | 88.29 | wind | 9 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 538 | 88.31 | temperature | 25 | 10 | > th | dose dependent | sin | 3 | NA |
| 569 | 88.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 16 |
| 591 | 88.42 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 619 | 88.45 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 625 | 88.47 | temperature | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 673 | 88.55 | radiation | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 738 | 88.67 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 794 | 88.72 | radiation | 20 | 30 | > th | dose independent | no | NA | NA |
| 913 | 88.74 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 970 | 88.81 | humidity | 90 | 90 | < th | dose dependent | sin | 6 | NA |
| 977 | 88.82 | wind | 9 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 984 | 88.83 | wind | 9 | 14400 | > th | dose independent | rect. | 11 | 21 |