Os05g0551600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1639 family protein.
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Os05g0551600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.59 | 0.422 | 10.1 | -0.924 | 0.0969 | 0.82 | -1.13 | 1.75 | -0.136 | 22.5 | 20.33 | 1383 | -- | -- |
| 81.29 | 0.42 | 10.2 | -1.43 | 0.097 | 0.878 | -1.09 | -- | -0.235 | 22.3 | 23.12 | 1384 | -- | -- |
| 85.5 | 0.431 | 10.1 | -0.904 | 0.114 | 0.801 | -- | 1.61 | -0.134 | 23.1 | 21 | 1498 | -- | -- |
| 86.11 | 0.432 | 10.2 | -1.38 | 0.0982 | 0.876 | -- | -- | -0.234 | 22.1 | 23.14 | 1413 | -- | -- |
| 86.34 | 0.433 | 10.2 | -0.976 | -- | 0.821 | -- | 1.35 | -0.165 | -- | 21.2 | 1428 | -- | -- |
| 110.97 | 0.494 | 10.2 | -1.1 | 0.148 | -- | -1.01 | -- | -0.0648 | 22.6 | -- | -- | -- | -- |
| 115.04 | 0.502 | 10.2 | -1.06 | 0.161 | -- | -- | -- | -0.0633 | 0.0591 | -- | -- | -- | -- |
| 86.68 | 0.434 | 10.2 | -1.38 | -- | 0.891 | -- | -- | -0.25 | -- | 22.94 | 1358 | -- | -- |
| 131.88 | 0.535 | 10.1 | -- | 0.106 | 0.558 | -- | -- | -0.00418 | 21.6 | 24.5 | 1385 | -- | -- |
| 116.67 | 0.505 | 10.2 | -1.06 | -- | -- | -- | -- | -0.061 | -- | -- | -- | -- | -- |
| 144.91 | 0.563 | 10.1 | -- | 0.148 | -- | -- | -- | 0.0553 | 23.7 | -- | -- | -- | -- |
| 132.48 | 0.536 | 10.1 | -- | -- | 0.588 | -- | -- | -0.0189 | -- | 24.09 | 1309 | -- | -- |
| 146.28 | 0.565 | 10.1 | -- | -- | -- | -- | -- | 0.0566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 2 | 78.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 8 | 78.94 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 14 | 79.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 31 | 79.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 43 | 80.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 52 | 80.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 55 | 80.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 57 | 80.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 21 |
| 83 | 80.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 91 | 80.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 99 | 80.69 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 103 | 80.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 117 | 80.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 152 | 80.78 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 184 | 80.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 202 | 80.90 | temperature | 10 | 1440 | > th | dose dependent | sin | 18 | NA |
| 219 | 80.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 227 | 80.96 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 241 | 80.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 16 |
| 243 | 80.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 18 |
| 314 | 81.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 344 | 81.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 18 |
| 503 | 81.23 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 591 | 81.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 656 | 81.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 691 | 81.43 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 702 | 81.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 703 | 81.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 784 | 81.54 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 939 | 81.74 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 998 | 81.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |