Os05g0551100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0551100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 402.67 | 0.943 | 7.33 | -5.5 | 1.36 | -3.25 | 0.0369 | 0.96 | -1.6 | 21.4 | 5.754 | 1429 | 7.86 | -- |
| 404.09 | 0.936 | 7.33 | -5.36 | 1.34 | -3.22 | 0.00407 | -- | -1.58 | 21.4 | 5.71 | 1428 | 7.87 | -- |
| 402.68 | 0.935 | 7.33 | -5.5 | 1.36 | -3.24 | -- | 0.97 | -1.6 | 21.4 | 5.711 | 1429 | 7.86 | -- |
| 404.07 | 0.936 | 7.32 | -5.34 | 1.33 | -3.21 | -- | -- | -1.57 | 21.4 | 5.714 | 1428 | 7.85 | -- |
| 413.59 | 0.947 | 7.27 | -5.39 | -- | -4.31 | -- | 1.39 | -1.49 | -- | 6.28 | 1374 | 8.43 | -- |
| 645.93 | 1.19 | 7.22 | -5.36 | 1.59 | -- | 0.659 | -- | -1.1 | 21.9 | -- | -- | -- | -- |
| 647.51 | 1.19 | 7.22 | -5.38 | 1.59 | -- | -- | -- | -1.1 | 21.8 | -- | -- | -- | -- |
| 412.63 | 0.946 | 7.27 | -5.26 | -- | -4.35 | -- | -- | -1.5 | -- | 6.291 | 1374 | 8.22 | -- |
| 1070.14 | 1.52 | 7.22 | -- | 1.58 | -3.98 | -- | -- | -1.08 | 21.3 | 10 | 1437 | 8.1 | -- |
| 798.06 | 1.32 | 7.18 | -5.36 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 1410.42 | 1.76 | 7.09 | -- | 1.58 | -- | -- | -- | -0.497 | 21.6 | -- | -- | -- | -- |
| 1081.4 | 1.53 | 7.15 | -- | -- | -4.9 | -- | -- | -0.919 | -- | 10 | 1384 | 8.35 | -- |
| 1557 | 1.84 | 7.05 | -- | -- | -- | -- | -- | -0.503 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 411.66 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 2 | 412.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 3 | 412.40 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 4 | 412.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 8 | 412.56 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 13 | 413.00 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 17 | 414.48 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 18 | 414.65 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 30 | 415.60 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 34 | 416.00 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 77 | 418.95 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 123 | 421.99 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 124 | 422.33 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 125 | 422.45 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 126 | 422.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 127 | 422.76 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 128 | 423.11 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 131 | 423.82 | radiation | 10 | 1440 | < th | dose dependent | sin | 14 | NA |
| 134 | 424.10 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 149 | 424.73 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 150 | 424.93 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 154 | 425.06 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 158 | 425.37 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 159 | 425.39 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 172 | 426.42 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 194 | 428.00 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 211 | 428.35 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 223 | 429.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 227 | 429.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 241 | 429.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 291 | 430.15 | temperature | 25 | 1440 | > th | dose dependent | sin | 22 | NA |
| 302 | 430.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 335 | 430.55 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 373 | 430.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 376 | 430.98 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 391 | 431.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 393 | 431.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 395 | 431.28 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 399 | 431.33 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 419 | 431.52 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 425 | 431.65 | radiation | 10 | 1440 | > th | dose independent | sin | 14 | NA |
| 436 | 431.89 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 448 | 432.08 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 465 | 432.35 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 482 | 432.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 483 | 432.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 20 |
| 504 | 432.84 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 544 | 433.59 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 549 | 433.65 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 566 | 433.94 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 569 | 433.99 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 610 | 434.62 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 641 | 434.79 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 645 | 434.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 649 | 434.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 676 | 435.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 679 | 435.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 708 | 435.53 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 755 | 436.81 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 770 | 436.83 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 801 | 437.63 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 850 | 438.06 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 872 | 438.16 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 876 | 438.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 919 | 438.72 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 920 | 438.72 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 929 | 438.87 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 931 | 438.88 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 955 | 439.09 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 1000 | 439.39 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 13 |