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Os05g0550000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0199) R2 : 0.842
β1 : -1.53 (0.0728) R2dD : 0.159 R2D : 0.0934
β2 : 2.23 (0.0501) R2dC : 0.686 R2C : 0.642
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.55 (0.0424) R2dN8 : 0.0779 R2N8 : 0.012
σ : 0.374
deviance : 63.71
__
_____
C
peak time of C : 3.61
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.1 0.352 11.7 -1.17 2.04 -0.674 1.08 2.78 -0.45 3.71 25.7 11 -- --
58.35 0.358 11.8 -1.45 2.05 -0.453 0.714 -- -0.495 3.69 24.26 19 -- --
58.98 0.358 11.8 -1.28 2.05 -0.66 -- 1.88 -0.485 3.7 26 9 -- --
59.73 0.36 11.8 -1.43 2.04 -0.514 -- -- -0.507 3.67 25.08 10 -- --
196.1 0.652 11.7 -0.579 -- -2.58 -- 3.81 -0.119 -- 24.3 133 -- --
61.49 0.368 11.8 -1.52 2.23 -- 0.855 -- -0.545 3.62 -- -- -- --
63.71 0.374 11.8 -1.53 2.23 -- -- -- -0.55 3.61 -- -- -- --
202.54 0.663 11.7 -1.06 -- -2.3 -- -- -0.271 -- 24.17 126 -- --
112.63 0.494 11.7 -- 1.85 -0.898 -- -- -0.28 3.74 23.73 13 -- --
340.56 0.862 11.8 -1.44 -- -- -- -- -0.491 -- -- -- -- --
125.77 0.525 11.7 -- 2.2 -- -- -- -0.379 3.62 -- -- -- --
232.62 0.71 11.7 -- -- -2.44 -- -- -0.131 -- 24.2 123 -- --
395.33 0.928 11.8 -- -- -- -- -- -0.331 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 50.68 temperature 10.0 270 > th dose dependent rect. 5 19
11 52.73 temperature 20.0 720 > th dose dependent rect. 5 4
12 52.76 temperature 20.0 720 > th dose independent rect. 5 2
13 52.77 radiation 40.0 270 < th dose dependent rect. 15 14
21 52.99 temperature 10.0 720 > th dose dependent rect. 5 4
28 53.10 temperature 20.0 270 > th dose dependent rect. 5 8
32 53.16 temperature 10.0 270 > th dose dependent rect. 5 10
34 53.21 temperature 15.0 90 > th dose dependent rect. 2 4
38 53.25 wind 9.0 270 < th dose dependent rect. 15 14
39 53.29 wind 3.0 270 < th dose independent rect. 2 1
42 53.34 temperature 30.0 30 < th dose dependent rect. 2 21
49 53.46 temperature 15.0 270 > th dose dependent rect. 2 1
52 53.49 temperature 10.0 270 > th dose dependent rect. 24 5
60 53.57 wind 7.0 270 < th dose dependent rect. 2 1
64 53.59 wind 5.0 90 < th dose dependent rect. 2 15
65 53.61 wind 9.0 720 < th dose independent rect. 24 14
70 53.63 wind 5.0 90 < th dose dependent rect. 2 4
79 53.68 humidity 50.0 270 > th dose independent rect. 15 14
83 53.69 wind 5.0 270 < th dose independent rect. 24 5
89 53.72 wind 7.0 270 < th dose dependent rect. 24 5
95 53.73 radiation 10.0 30 < th dose dependent rect. 2 21
96 53.74 temperature 30.0 270 < th dose dependent rect. 10 9
109 53.81 radiation 10.0 30 < th dose independent rect. 2 8
111 53.81 wind 5.0 90 < th dose dependent rect. 2 13
112 53.82 temperature 25.0 270 > th dose independent rect. 6 7
122 53.86 radiation 1.0 270 < th dose dependent rect. 24 19
123 53.87 precipitation 0.1 10 < th dose independent rect. 6 20
126 53.87 precipitation 0.1 10 < th dose dependent rect. 6 20
127 53.88 temperature 25.0 720 < th dose independent rect. 23 1
128 53.88 wind 9.0 720 < th dose independent rect. 2 10
129 53.88 wind 3.0 90 < th dose independent rect. 2 15
135 53.92 wind 1.0 30 > th dose independent rect. 23 12
140 53.93 temperature 25.0 720 < th dose independent rect. 10 1
151 53.95 radiation 10.0 30 < th dose independent rect. 2 6
152 53.95 radiation 10.0 30 < th dose independent rect. 2 21
159 53.98 wind 3.0 90 < th dose independent rect. 2 13
163 53.99 precipitation 0.1 90 < th dose independent rect. 2 4
165 53.99 precipitation 0.1 90 < th dose dependent rect. 2 4
173 54.00 radiation 10.0 90 < th dose independent rect. 2 4
174 54.00 precipitation 0.1 10 < th dose independent rect. 2 4
175 54.00 temperature 25.0 270 > th dose dependent sin 7 NA
178 54.00 precipitation 0.1 10 < th dose dependent rect. 2 4
185 54.01 radiation 1.0 270 < th dose dependent rect. 24 21
186 54.02 wind 7.0 270 < th dose independent rect. 15 14
188 54.02 radiation 10.0 90 < th dose dependent rect. 2 5
192 54.02 wind 9.0 30 < th dose dependent rect. 2 21
193 54.03 radiation 10.0 10 < th dose independent rect. 2 4
200 54.05 atmosphere 1015.0 720 < th dose independent rect. 2 10
201 54.05 radiation 30.0 270 < th dose independent rect. 15 14
202 54.05 temperature 25.0 90 < th dose independent rect. 2 20
209 54.07 temperature 30.0 10 < th dose independent rect. 2 12
210 54.07 wind 5.0 30 < th dose dependent rect. 2 21
228 54.10 radiation 10.0 90 < th dose dependent rect. 2 8
231 54.11 wind 5.0 10 < th dose independent rect. 2 4
234 54.11 atmosphere 1010.0 10 < th dose independent rect. 2 5
240 54.12 temperature 10.0 90 > th dose independent rect. 2 4
242 54.12 temperature 30.0 90 < th dose independent rect. 2 4
243 54.12 humidity 50.0 90 > th dose independent rect. 2 4
246 54.12 atmosphere 995.0 90 > th dose independent rect. 2 4
247 54.12 atmosphere 1010.0 90 < th dose independent rect. 2 4
252 54.12 temperature 10.0 90 > th dose independent rect. 6 20
272 54.16 precipitation 0.1 270 < th dose independent rect. 2 1
274 54.16 temperature 10.0 10 > th dose independent rect. 2 4
276 54.16 temperature 30.0 10 < th dose independent rect. 2 4
277 54.16 humidity 50.0 10 > th dose independent rect. 2 4
280 54.16 atmosphere 995.0 10 > th dose independent rect. 2 4
287 54.16 temperature 10.0 10 > th dose independent rect. 6 20
288 54.16 precipitation 0.1 270 < th dose dependent rect. 2 1
291 54.17 temperature 10.0 270 > th dose independent rect. 2 1
293 54.17 temperature 30.0 270 < th dose independent rect. 2 1
294 54.17 humidity 50.0 270 > th dose independent rect. 2 1
297 54.17 atmosphere 995.0 270 > th dose independent rect. 2 1
298 54.17 atmosphere 1010.0 270 < th dose independent rect. 2 1
300 54.17 radiation 1.0 270 < th dose independent rect. 2 1
307 54.17 temperature 10.0 270 > th dose independent rect. 3 23
308 54.17 radiation 1.0 270 < th dose dependent rect. 2 1
318 54.18 temperature 30.0 10 < th dose independent rect. 2 21
321 54.18 radiation 40.0 90 < th dose dependent rect. 13 17
340 54.20 temperature 30.0 270 < th dose independent rect. 15 14
349 54.22 wind 9.0 1440 < th dose independent rect. 3 4
350 54.22 temperature 10.0 1440 > th dose independent rect. 3 4
353 54.22 temperature 30.0 1440 < th dose independent rect. 3 4
357 54.22 humidity 50.0 1440 > th dose independent rect. 3 4
362 54.22 atmosphere 995.0 1440 > th dose independent rect. 3 4
363 54.22 radiation 40.0 1440 < th dose independent rect. 3 4
367 54.22 temperature 10.0 1440 > th dose independent rect. 7 20
390 54.27 precipitation 0.1 270 < th dose independent rect. 24 5
393 54.27 radiation 1.0 270 < th dose dependent rect. 24 5
394 54.27 precipitation 0.1 270 < th dose dependent rect. 24 5
400 54.28 temperature 10.0 270 > th dose independent rect. 24 5
402 54.28 temperature 30.0 270 < th dose independent rect. 24 5
403 54.28 humidity 50.0 270 > th dose independent rect. 24 5
406 54.28 atmosphere 995.0 270 > th dose independent rect. 24 5
407 54.28 atmosphere 1010.0 270 < th dose independent rect. 24 5
409 54.28 radiation 1.0 270 < th dose independent rect. 24 5
415 54.28 precipitation 0.1 270 < th dose independent rect. 4 21
421 54.28 precipitation 0.1 270 < th dose dependent rect. 4 21
425 54.29 radiation 10.0 30 < th dose dependent rect. 2 15
431 54.31 temperature 10.0 720 > th dose independent rect. 2 10
432 54.31 atmosphere 995.0 720 > th dose independent rect. 2 10
435 54.31 temperature 10.0 720 > th dose independent rect. 12 14
446 54.33 temperature 30.0 10 < th dose dependent rect. 11 12
455 54.35 radiation 10.0 30 < th dose dependent rect. 24 23
457 54.36 precipitation 0.1 270 < th dose independent rect. 5 10
459 54.36 precipitation 0.1 270 < th dose dependent rect. 5 10
464 54.38 radiation 10.0 30 < th dose independent rect. 24 23
471 54.39 temperature 15.0 270 > th dose independent rect. 15 14
478 54.40 humidity 50.0 270 > th dose dependent rect. 2 1
481 54.40 radiation 10.0 90 < th dose dependent rect. 2 11
500 54.41 temperature 10.0 270 > th dose independent rect. 4 21
526 54.42 radiation 10.0 30 < th dose independent rect. 2 15
527 54.42 wind 9.0 90 < th dose independent rect. 6 20
538 54.43 humidity 50.0 90 > th dose dependent rect. 2 4
539 54.44 wind 3.0 90 < th dose independent rect. 2 19
549 54.45 temperature 10.0 720 > th dose independent rect. 14 10
550 54.45 temperature 10.0 720 > th dose independent rect. 24 14
551 54.45 atmosphere 995.0 720 > th dose independent rect. 24 14
553 54.45 wind 9.0 10 < th dose independent rect. 6 20
557 54.46 radiation 1.0 270 < th dose independent rect. 24 19
567 54.47 wind 9.0 30 < th dose dependent rect. 2 10
572 54.48 atmosphere 995.0 10 > th dose independent rect. 6 20
576 54.49 radiation 40.0 270 < th dose independent rect. 20 13
577 54.49 atmosphere 995.0 90 > th dose independent rect. 6 20
586 54.50 temperature 10.0 270 > th dose independent rect. 5 10
587 54.50 atmosphere 1015.0 270 < th dose independent rect. 5 10
589 54.50 humidity 50.0 10 > th dose independent rect. 6 20
599 54.51 atmosphere 995.0 270 > th dose independent rect. 5 10
614 54.52 temperature 30.0 10 < th dose independent rect. 11 12
615 54.52 wind 1.0 270 > th dose independent rect. 5 19
633 54.54 wind 5.0 30 < th dose dependent rect. 11 19
634 54.55 atmosphere 1015.0 1440 < th dose independent rect. 3 4
655 54.58 atmosphere 1005.0 10 > th dose independent rect. 2 4
659 54.58 wind 9.0 30 < th dose dependent rect. 2 12
672 54.60 atmosphere 1005.0 90 > th dose independent rect. 2 4
680 54.60 temperature 25.0 30 > th dose dependent rect. 19 20
685 54.61 wind 9.0 270 < th dose independent rect. 9 11
687 54.61 humidity 60.0 720 > th dose dependent rect. 22 2
705 54.63 radiation 10.0 14400 < th dose dependent rect. 24 3
731 54.66 radiation 30.0 90 < th dose independent rect. 13 17
751 54.68 humidity 50.0 270 > th dose independent rect. 5 10
763 54.69 atmosphere 995.0 90 > th dose dependent rect. 2 4
786 54.70 atmosphere 1005.0 270 > th dose independent rect. 24 5
789 54.70 temperature 30.0 10 < th dose independent rect. 15 23
837 54.73 precipitation 0.1 720 < th dose independent rect. 2 10
843 54.73 precipitation 0.1 720 < th dose dependent rect. 2 10
854 54.75 temperature 30.0 30 < th dose independent rect. 2 10
856 54.75 wind 1.0 30 > th dose independent rect. 6 20
861 54.75 temperature 30.0 270 < th dose dependent rect. 24 19
866 54.76 wind 9.0 270 < th dose independent rect. 5 10
869 54.76 atmosphere 995.0 10 > th dose dependent rect. 2 4
876 54.77 wind 9.0 720 < th dose independent rect. 17 19
904 54.80 atmosphere 1005.0 270 > th dose independent rect. 2 1
939 54.81 wind 9.0 720 < th dose independent rect. 24 21