Os05g0549800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os05g0549800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 565.45 | 1.12 | 8.44 | 6.66 | 1.42 | -0.0953 | -1.6 | -12.3 | 1.89 | 22.5 | 33.11 | 1351 | -- | -- |
| 571.93 | 1.11 | 8.17 | 8.58 | 1.39 | -1.46 | -1.61 | -- | 1.98 | 22.6 | 33.2 | 1383 | -- | -- |
| 574.87 | 1.12 | 8.43 | 6.78 | 1.45 | -0.13 | -- | -12.3 | 1.89 | 22.4 | 33.2 | 1284 | -- | -- |
| 580.72 | 1.12 | 8.2 | 8.73 | 1.45 | -1.51 | -- | -- | 1.9 | 22.3 | 33.12 | 1312 | -- | -- |
| 698.1 | 1.23 | 8.38 | 6.81 | -- | -0.0483 | -- | -11.9 | 1.92 | -- | 33.1 | 1460 | -- | -- |
| 682.55 | 1.22 | 8.14 | 8.27 | 1.31 | -- | -1.77 | -- | 2.17 | 22.1 | -- | -- | -- | -- |
| 694.45 | 1.23 | 8.14 | 8.34 | 1.33 | -- | -- | -- | 2.17 | 21.9 | -- | -- | -- | -- |
| 705.21 | 1.24 | 8.17 | 8.73 | -- | -1.34 | -- | -- | 1.94 | -- | 32.9 | 1445 | -- | -- |
| 2482.77 | 2.32 | 8.35 | -- | 1.64 | 0.886 | -- | -- | 1.18 | 23.6 | 27.9 | 22 | -- | -- |
| 799.95 | 1.32 | 8.1 | 8.35 | -- | -- | -- | -- | 2.17 | -- | -- | -- | -- | -- |
| 2528.03 | 2.35 | 8.34 | -- | 1.36 | -- | -- | -- | 1.25 | 22.3 | -- | -- | -- | -- |
| 2339.83 | 2.25 | 8.36 | -- | -- | 4.15 | -- | -- | 0.912 | -- | 18.6 | 930 | -- | -- |
| 2641.33 | 2.4 | 8.31 | -- | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 549.73 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 4 | 550.58 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 7 | 550.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 13 | 551.68 | wind | 9 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 24 | 552.70 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 29 | 553.09 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 30 | 553.10 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 39 | 554.26 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 42 | 554.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 47 | 554.95 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 49 | 555.14 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 62 | 556.30 | wind | 7 | 43200 | > th | dose dependent | sin | 12 | NA |
| 72 | 556.98 | wind | 9 | 43200 | < th | dose independent | sin | 12 | NA |
| 75 | 557.47 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 78 | 557.74 | wind | 9 | 43200 | > th | dose independent | sin | 12 | NA |
| 90 | 558.61 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 110 | 559.39 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 137 | 560.35 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 151 | 560.43 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 194 | 561.41 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 207 | 561.86 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 224 | 562.42 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 266 | 563.67 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 305 | 564.76 | temperature | 30 | 1440 | > th | dose dependent | sin | 13 | NA |
| 308 | 564.83 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 350 | 565.33 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 467 | 567.60 | humidity | 60 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 572 | 569.05 | humidity | 80 | 1440 | < th | dose dependent | sin | 15 | NA |
| 600 | 569.21 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 630 | 569.55 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 727 | 569.66 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 728 | 569.67 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 823 | 571.15 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 844 | 571.29 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 897 | 571.86 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 901 | 571.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 905 | 571.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 907 | 571.95 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 928 | 572.08 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 929 | 572.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 930 | 572.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 950 | 572.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 11 |
| 955 | 572.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 958 | 572.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 966 | 572.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 968 | 572.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |