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Os05g0545900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0152) R2 : 0.561
β1 : 1.32 (0.0557) R2dD : 0.556 R2D : 0.444
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.31 (0.0325) R2dN8 : 0.117 R2N8 : 0.00524
σ : 0.286
deviance : 37.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.56 0.208 11.9 1.22 0.545 0.426 -0.129 0.693 0.34 23.2 70.55 1210 -- --
20.12 0.209 11.9 1.29 0.554 0.445 -0.24 -- 0.356 23.3 69.1 1202 -- --
19.6 0.206 11.9 1.22 0.568 0.426 -- 0.755 0.34 23.2 70 1157 -- --
20.31 0.21 11.9 1.29 0.497 0.427 -- -- 0.359 23.2 66.59 1350 -- --
31.33 0.262 11.9 1.31 -- 0.313 -- -0.121 0.336 -- 70 1157 -- --
23.16 0.226 11.9 1.29 0.472 -- -0.267 -- 0.306 23 -- -- -- --
23.46 0.227 11.9 1.31 0.473 -- -- -- 0.307 22.9 -- -- -- --
30.91 0.26 11.9 1.3 -- 0.333 -- -- 0.33 -- 65.49 3050 -- --
61.7 0.366 11.9 -- 0.539 0.68 -- -- 0.347 23.1 63 6862 -- --
37.37 0.286 11.9 1.32 -- -- -- -- 0.31 -- -- -- -- --
68.39 0.387 12 -- 0.485 -- -- -- 0.161 23.1 -- -- -- --
57.32 0.353 11.9 -- -- 1.42 -- -- 0.277 -- 11.3 47520 -- --
83.05 0.425 11.9 -- -- -- -- -- 0.164 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.90 wind 3.0 43200 < th dose dependent rect. 4 2
2 18.13 wind 1.0 43200 > th dose independent rect. 5 1
4 18.33 wind 1.0 43200 > th dose independent rect. 1 7
5 18.35 wind 1.0 43200 < th dose independent rect. 1 7
7 18.43 precipitation 0.1 14400 < th dose independent rect. 13 3
8 18.43 precipitation 0.1 14400 < th dose dependent rect. 13 3
9 18.45 wind 3.0 43200 < th dose dependent rect. 1 5
11 18.47 wind 1.0 14400 < th dose independent rect. 4 1
15 18.49 precipitation 0.1 14400 > th dose independent rect. 13 3
16 18.49 wind 1.0 43200 < th dose independent rect. 3 5
17 18.49 wind 1.0 43200 > th dose dependent rect. 5 1
19 18.51 wind 1.0 43200 > th dose independent rect. 3 4
27 18.53 precipitation 0.1 14400 > th dose dependent rect. 12 4
39 18.58 precipitation 0.1 4320 > th dose dependent rect. 23 18
44 18.61 wind 1.0 43200 < th dose independent rect. 4 3
64 18.66 precipitation 0.1 14400 > th dose dependent rect. 9 8
67 18.67 humidity 70.0 1440 > th dose dependent rect. 11 1
71 18.68 precipitation 0.1 4320 < th dose independent rect. 23 18
74 18.68 precipitation 0.1 4320 < th dose dependent rect. 23 18
75 18.69 precipitation 0.1 14400 > th dose independent rect. 17 1
83 18.70 precipitation 0.1 4320 > th dose independent rect. 23 18
86 18.71 humidity 70.0 1440 > th dose independent rect. 11 1
96 18.73 precipitation 0.1 14400 < th dose independent rect. 9 8
99 18.73 precipitation 0.1 14400 < th dose dependent rect. 9 8
100 18.74 precipitation 0.1 14400 < th dose independent rect. 17 1
105 18.74 precipitation 0.1 14400 < th dose dependent rect. 17 1
110 18.75 precipitation 0.1 14400 > th dose independent rect. 9 8
114 18.79 humidity 70.0 1440 > th dose independent rect. 10 3
115 18.79 precipitation 0.1 14400 > th dose dependent rect. 17 1
132 18.84 humidity 70.0 1440 > th dose dependent rect. 9 5
150 18.89 humidity 70.0 1440 > th dose dependent rect. 10 3
209 19.01 humidity 80.0 1440 < th dose independent rect. 9 5
213 19.01 wind 1.0 43200 < th dose dependent rect. 2 11
263 19.09 humidity 70.0 1440 > th dose dependent rect. 5 10
264 19.09 humidity 70.0 1440 > th dose dependent rect. 3 12
296 19.14 humidity 80.0 1440 > th dose independent rect. 8 7
301 19.14 humidity 70.0 1440 > th dose dependent sin 3 NA
313 19.15 precipitation 0.1 4320 > th dose dependent sin 5 NA
336 19.17 precipitation 0.1 4320 < th dose independent sin 4 NA
342 19.17 precipitation 0.1 4320 < th dose dependent sin 4 NA
352 19.17 precipitation 0.1 4320 > th dose dependent rect. 19 22
353 19.18 precipitation 0.1 4320 > th dose independent sin 4 NA
354 19.18 precipitation 0.1 14400 > th dose independent rect. 19 1
364 19.18 humidity 70.0 1440 > th dose independent rect. 19 19
377 19.19 humidity 80.0 14400 > th dose independent rect. 13 3
380 19.19 humidity 70.0 1440 > th dose independent rect. 19 21
387 19.20 precipitation 0.1 14400 < th dose independent rect. 19 1
389 19.20 precipitation 0.1 4320 < th dose independent rect. 3 11
393 19.20 precipitation 0.1 14400 < th dose dependent rect. 19 1
396 19.20 precipitation 0.1 4320 < th dose dependent rect. 3 11
410 19.21 precipitation 0.1 4320 > th dose independent rect. 3 11
421 19.22 humidity 80.0 1440 < th dose independent rect. 11 1
425 19.22 humidity 80.0 1440 < th dose independent rect. 6 9
510 19.26 humidity 80.0 90 > th dose independent rect. 5 14
516 19.26 humidity 80.0 1440 < th dose independent rect. 20 19
522 19.27 humidity 80.0 1440 > th dose independent sin 3 NA
527 19.27 precipitation 0.1 14400 > th dose independent rect. 3 17
528 19.27 precipitation 0.1 14400 < th dose independent rect. 3 17
531 19.27 wind 5.0 43200 < th dose dependent rect. 7 1
532 19.27 precipitation 0.1 14400 > th dose dependent rect. 19 1
538 19.27 precipitation 0.1 14400 < th dose dependent rect. 3 17
558 19.29 humidity 80.0 1440 < th dose independent sin 3 NA
590 19.31 precipitation 0.1 14400 > th dose independent rect. 12 8
610 19.32 precipitation 0.1 14400 < th dose independent rect. 13 7
614 19.32 precipitation 0.1 14400 > th dose independent rect. 9 11
622 19.32 precipitation 0.1 14400 < th dose dependent rect. 13 7
638 19.33 precipitation 0.1 14400 < th dose independent rect. 9 11
650 19.33 precipitation 0.1 14400 < th dose dependent rect. 9 11
667 19.34 wind 3.0 14400 < th dose dependent rect. 2 1
671 19.34 humidity 70.0 90 > th dose dependent rect. 5 13
684 19.35 precipitation 0.1 14400 > th dose independent rect. 7 13
708 19.36 precipitation 0.1 14400 < th dose independent rect. 7 13
714 19.36 precipitation 0.1 14400 < th dose dependent rect. 7 13
729 19.37 humidity 80.0 14400 > th dose dependent rect. 13 2
737 19.38 wind 3.0 43200 < th dose independent rect. 7 1
772 19.39 precipitation 0.1 14400 > th dose independent sin 1 NA
773 19.39 precipitation 0.1 14400 < th dose independent sin 1 NA
775 19.39 humidity 80.0 14400 < th dose independent rect. 14 1
784 19.39 precipitation 0.1 14400 < th dose dependent sin 1 NA
822 19.41 wind 1.0 43200 > th dose dependent rect. 23 9
862 19.43 precipitation 0.1 4320 > th dose independent rect. 18 23
863 19.43 precipitation 0.1 4320 < th dose independent rect. 18 23
871 19.43 precipitation 0.1 4320 < th dose dependent rect. 18 23
927 19.45 precipitation 0.1 4320 > th dose dependent rect. 18 14
932 19.46 wind 1.0 43200 > th dose independent rect. 1 1
955 19.46 precipitation 0.1 4320 > th dose dependent rect. 18 16
991 19.48 wind 9.0 14400 < th dose independent rect. 10 1