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Os05g0540600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.3 (0.0171) R2 : 0.0553
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.186 (0.0361) R2dN8 : 0.0714 R2N8 : 0.0553
σ : 0.323
deviance : 47.8
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.92 0.257 9.35 -0.199 0.147 -1.06 -0.204 0.371 -0.0126 2.38 30.5 14 -- --
30.06 0.255 9.34 -0.143 0.158 -1.07 -0.0955 -- 0.00761 2.28 30.42 18 -- --
30.02 0.255 9.35 -0.165 0.153 -1.07 -- 0.188 -0.00537 2.31 30.5 13 -- --
30.06 0.255 9.34 -0.136 0.152 -1.07 -- -- 0.00247 2.29 30.4 12 -- --
31.02 0.261 9.34 -0.121 -- -0.908 -- 0.192 0.0289 -- 30.5 13 -- --
44.8 0.314 9.3 0.11 0.205 -- 0.23 -- 0.202 14.4 -- -- -- --
44.99 0.314 9.3 0.116 0.205 -- -- -- 0.203 14.2 -- -- -- --
30.97 0.259 9.34 -0.0968 -- -0.915 -- -- 0.032 -- 30.33 18 -- --
30.52 0.257 9.34 -- 0.14 -1.03 -- -- 0.00893 2.25 30.44 12 -- --
47.5 0.322 9.3 0.107 -- -- -- -- 0.198 -- -- -- -- --
45.35 0.315 9.3 -- 0.203 -- -- -- 0.19 14.2 -- -- -- --
31.2 0.26 9.33 -- -- -0.887 -- -- 0.0485 -- 30.42 12 -- --
47.8 0.323 9.3 -- -- -- -- -- 0.186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.82 temperature 30 10 < th dose dependent rect. 11 23
3 29.94 temperature 30 10 < th dose dependent rect. 15 23
4 29.95 temperature 30 10 < th dose dependent rect. 9 23
6 29.98 temperature 30 10 < th dose dependent no NA NA
7 29.99 temperature 30 10 < th dose dependent rect. 13 23
12 30.07 temperature 30 90 < th dose dependent rect. 21 23
14 30.10 temperature 30 90 < th dose dependent rect. 17 23
16 30.18 temperature 10 270 > th dose dependent rect. 4 23
17 30.19 temperature 30 10 < th dose dependent rect. 17 23
19 30.23 temperature 30 10 < th dose dependent rect. 3 23
20 30.24 temperature 10 90 > th dose dependent no NA NA
22 30.29 temperature 30 10 < th dose dependent rect. 7 23
24 30.37 temperature 10 10 > th dose dependent no NA NA
34 30.51 temperature 15 10 > th dose dependent rect. 23 23
38 30.60 temperature 30 10 < th dose dependent rect. 21 23
40 30.64 temperature 15 270 > th dose dependent rect. 14 23
43 30.66 temperature 15 270 > th dose dependent rect. 16 23
70 31.01 temperature 30 10 < th dose dependent rect. 1 23
71 31.03 temperature 30 90 < th dose dependent rect. 1 23
81 31.16 temperature 10 720 > th dose dependent rect. 19 23
112 31.42 temperature 10 720 > th dose dependent rect. 10 23
118 31.46 temperature 10 720 > th dose dependent rect. 23 23
154 31.60 temperature 10 720 > th dose dependent rect. 8 23
221 31.80 temperature 15 10 > th dose dependent rect. 1 23
247 31.87 temperature 15 720 > th dose dependent rect. 23 19
447 32.48 temperature 15 10 > th dose dependent rect. 21 23
673 32.90 temperature 10 1440 > th dose dependent sin 6 NA
686 32.91 temperature 10 1440 > th dose dependent rect. 24 14
919 32.99 temperature 30 1440 < th dose dependent sin 5 NA
959 33.00 temperature 30 1440 < th dose dependent rect. 21 17
999 33.01 temperature 10 1440 > th dose dependent rect. 3 7
1000 33.01 temperature 30 1440 < th dose dependent rect. 3 7