Os05g0539800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF778 family protein.
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Os05g0539800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF778 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392.5 | 0.931 | 7.54 | -2.28 | 3.58 | -2.35 | 2.24 | -1.91 | -0.0177 | 14.3 | 79.71 | 734 | 18.1 | 12.8 |
| 394.68 | 0.925 | 7.54 | -2.22 | 3.56 | -2.44 | 2.61 | -- | -0.0206 | 14.3 | 79.65 | 740 | 18.1 | 12.8 |
| 409.05 | 0.942 | 7.51 | -2.26 | 3.59 | -2.26 | -- | -2.48 | -0.0158 | 14.3 | 79.06 | 735 | 18.2 | 12.6 |
| 417.41 | 0.952 | 7.53 | -2.11 | 3.57 | -2.62 | -- | -- | -0.0272 | 14.3 | 78.63 | 737 | 18.5 | 12.2 |
| 482.47 | 1.02 | 7.48 | -2.41 | -- | -4.1 | -- | -3.07 | 0.315 | -- | 161.1 | 285 | 17.8 | 12.3 |
| 493.22 | 1.04 | 7.47 | -2.27 | 4.24 | -- | 2.86 | -- | 0.275 | 14.4 | -- | -- | -- | -- |
| 522.87 | 1.07 | 7.46 | -2.19 | 4.24 | -- | -- | -- | 0.292 | 14.4 | -- | -- | -- | -- |
| 497 | 1.04 | 7.45 | -2.11 | -- | -3.79 | -- | -- | 0.371 | -- | 274.6 | 318 | 17.1 | 12.9 |
| 513.62 | 1.06 | 7.53 | -- | 3.71 | -2.91 | -- | -- | 0.255 | 14.2 | 75.65 | 667 | 19.8 | 7.95 |
| 1585.47 | 1.86 | 7.49 | -2.37 | -- | -- | -- | -- | 0.187 | -- | -- | -- | -- | -- |
| 649.58 | 1.19 | 7.4 | -- | 4.29 | -- | -- | -- | 0.536 | 14.4 | -- | -- | -- | -- |
| 621.13 | 1.16 | 7.42 | -- | -- | -3.73 | -- | -- | 0.541 | -- | 564.8 | 328 | 16.7 | 13.2 |
| 1733.92 | 1.94 | 7.43 | -- | -- | -- | -- | -- | 0.451 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 393.26 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 5 | 395.12 | temperature | 25.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 8 | 396.81 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 11 | 397.62 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 13 | 397.98 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 18 | 399.11 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 20 | 399.32 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 26 | 400.17 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 30 | 400.55 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 33 | 401.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 44 | 403.20 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 48 | 403.45 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 49 | 403.51 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 53 | 404.20 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 63 | 405.15 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 65 | 405.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 68 | 405.67 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 75 | 406.09 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 81 | 406.39 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 15 |
| 111 | 408.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 112 | 408.19 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 118 | 408.70 | radiation | 10.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 128 | 409.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 142 | 409.64 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 146 | 409.81 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 156 | 410.25 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 159 | 410.33 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 176 | 410.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 177 | 411.01 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 182 | 411.08 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 5 |
| 185 | 411.12 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 195 | 411.31 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 13 | 19 |
| 203 | 411.47 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 207 | 411.54 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 209 | 411.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 212 | 411.65 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 215 | 411.70 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 12 |
| 220 | 411.85 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 221 | 411.85 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 227 | 411.99 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 10 |
| 231 | 412.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 238 | 412.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 243 | 412.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 252 | 412.46 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 261 | 412.55 | humidity | 80.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 268 | 412.69 | radiation | 10.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 283 | 413.07 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 284 | 413.07 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 290 | 413.20 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 291 | 413.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 317 | 413.70 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 318 | 413.72 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 332 | 414.06 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 333 | 414.06 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 341 | 414.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 354 | 414.27 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 370 | 414.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 371 | 414.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 387 | 414.73 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 400 | 414.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 425 | 415.20 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 12 |
| 439 | 415.31 | humidity | 80.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 441 | 415.35 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 442 | 415.36 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 444 | 415.37 | radiation | 10.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 455 | 415.50 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 505 | 416.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 520 | 416.31 | radiation | 1.0 | 270 | > th | dose independent | sin | 3 | NA |
| 530 | 416.40 | wind | 9.0 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 547 | 416.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 549 | 416.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 550 | 416.65 | humidity | 70.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 553 | 416.67 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 4 | 4 |
| 556 | 416.71 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 560 | 416.72 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 563 | 416.72 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 566 | 416.72 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 569 | 416.72 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 600 | 417.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 601 | 417.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 606 | 417.14 | wind | 5.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 611 | 417.21 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 664 | 417.67 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 680 | 417.77 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 690 | 417.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 692 | 417.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 710 | 417.97 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 719 | 418.05 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 743 | 418.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 746 | 418.18 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 761 | 418.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 766 | 418.23 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 768 | 418.24 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 769 | 418.24 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 771 | 418.25 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 817 | 418.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 826 | 418.44 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 832 | 418.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 11 |
| 854 | 418.63 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 7 |
| 867 | 418.73 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 868 | 418.75 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 23 |
| 871 | 418.76 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 912 | 419.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 924 | 419.18 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 932 | 419.23 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 940 | 419.31 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 10 |