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Os05g0529200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Enoyl-CoA hydratase/isomerase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0114) R2 : 0.648
β1 : 1.28 (0.0472) R2dD : 0.829 R2D : -0.0554
β2 : -- (--) R2dC : -- R2C : --
β3 : -0.986 (0.0423) R2dE : 0.73 R2E : -0.356
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.429 (0.0279) R2dN8 : 0.358 R2N8 : -0.289
σ : 0.202
deviance : 18.89
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C
peak time of C : --
E
wheather : temperature
threshold : 18.26
memory length : 10293
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.15 0.2 12.1 1.33 0.116 -0.967 0.0608 0.208 0.451 20.5 18.72 10478 -- --
18.18 0.199 12.1 1.29 0.118 -0.993 0.0677 -- 0.436 20.5 18.2 10511 -- --
18.1 0.198 12.1 1.4 0.122 -0.893 -- 0.693 0.468 20.1 20.72 10374 -- --
18.19 0.199 12.1 1.29 0.116 -0.994 -- -- 0.435 20.4 18.18 10477 -- --
18.7 0.201 12.1 1.36 -- -0.883 -- 0.696 0.482 -- 22.03 10247 -- --
40.86 0.3 12.2 0.681 0.11 -- 0.0291 -- 0.0676 19.2 -- -- -- --
40.86 0.299 12.2 0.681 0.11 -- -- -- 0.0677 19.1 -- -- -- --
18.89 0.202 12.1 1.28 -- -0.986 -- -- 0.429 -- 18.26 10293 -- --
45.17 0.313 12.2 -- 0.106 -0.639 -- -- 0.0863 20 9.797 1589 -- --
41.5 0.301 12.2 0.679 -- -- -- -- 0.0658 -- -- -- -- --
53.08 0.341 12.2 -- 0.104 -- -- -- -0.0081 19.6 -- -- -- --
42.22 0.303 12.2 -- -- -0.476 -- -- 0.0861 -- 27.3 7270 -- --
53.65 0.342 12.2 -- -- -- -- -- -0.00953 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 18.02 humidity 90.0 43200 < th dose independent rect. 17 2
2 18.04 humidity 90.0 43200 > th dose independent rect. 21 1
3 18.06 humidity 90.0 43200 > th dose dependent rect. 21 1
4 18.10 temperature 20.0 14400 > th dose dependent rect. 17 5
10 18.15 temperature 20.0 14400 > th dose dependent rect. 17 2
37 18.32 radiation 40.0 14400 < th dose dependent rect. 18 7
53 18.39 radiation 1.0 14400 > th dose independent rect. 18 12
61 18.42 temperature 20.0 14400 > th dose dependent sin 17 NA
80 18.47 humidity 90.0 43200 < th dose independent rect. 17 5
83 18.48 humidity 90.0 43200 > th dose independent rect. 17 6
99 18.51 radiation 1.0 14400 > th dose independent rect. 18 1
113 18.52 temperature 25.0 14400 < th dose independent rect. 16 5
130 18.55 temperature 25.0 14400 > th dose independent rect. 17 3
131 18.55 temperature 25.0 14400 < th dose independent rect. 17 3
142 18.56 temperature 25.0 14400 > th dose independent rect. 16 5
161 18.58 radiation 1.0 14400 > th dose independent rect. 5 1
168 18.59 temperature 20.0 43200 > th dose independent rect. 19 2
170 18.59 precipitation 0.1 43200 < th dose independent rect. 17 2
171 18.59 precipitation 0.1 43200 < th dose dependent rect. 17 2
192 18.61 precipitation 0.1 43200 > th dose independent rect. 17 2
210 18.62 temperature 30.0 14400 < th dose dependent rect. 21 1
250 18.65 humidity 90.0 43200 < th dose independent rect. 21 1
251 18.65 radiation 1.0 14400 < th dose independent rect. 5 1
255 18.65 humidity 90.0 43200 > th dose dependent rect. 18 5
288 18.67 temperature 25.0 14400 < th dose independent rect. 15 9
326 18.69 temperature 25.0 14400 > th dose independent rect. 15 9
327 18.69 temperature 25.0 14400 < th dose independent rect. 14 11
330 18.69 radiation 30.0 14400 < th dose dependent rect. 18 2
350 18.70 humidity 90.0 43200 > th dose independent rect. 9 1
367 18.71 temperature 25.0 14400 < th dose independent sin 16 NA
370 18.71 temperature 20.0 14400 > th dose dependent no NA NA
385 18.72 temperature 25.0 14400 > th dose independent sin 16 NA
387 18.72 radiation 1.0 14400 < th dose independent rect. 18 7
391 18.72 radiation 1.0 14400 < th dose dependent rect. 18 2
431 18.73 temperature 30.0 14400 < th dose dependent rect. 18 6
443 18.74 humidity 90.0 43200 > th dose independent rect. 18 1
444 18.74 radiation 1.0 14400 < th dose independent rect. 18 5
473 18.74 temperature 20.0 14400 > th dose dependent rect. 20 23
475 18.75 radiation 1.0 14400 < th dose independent rect. 18 2
511 18.76 precipitation 0.1 43200 > th dose dependent rect. 16 3
595 18.80 temperature 20.0 43200 < th dose independent rect. 19 3
603 18.80 temperature 25.0 14400 < th dose independent rect. 10 22
637 18.81 temperature 25.0 14400 > th dose independent rect. 10 22
638 18.81 temperature 25.0 14400 < th dose independent rect. 4 22
664 18.82 temperature 25.0 14400 < th dose independent rect. 4 20
665 18.82 temperature 25.0 14400 < th dose independent rect. 6 20
672 18.82 temperature 25.0 14400 < th dose independent rect. 23 22
711 18.83 temperature 25.0 14400 > th dose independent rect. 12 20
723 18.83 temperature 25.0 14400 < th dose independent rect. 13 22
736 18.83 humidity 80.0 43200 > th dose dependent rect. 17 1
747 18.84 temperature 25.0 14400 < th dose independent no NA NA
767 18.84 temperature 25.0 14400 > th dose independent rect. 3 21
816 18.85 temperature 25.0 14400 > th dose independent rect. 13 22
817 18.85 temperature 25.0 14400 > th dose independent rect. 23 22
821 18.85 temperature 25.0 14400 > th dose independent rect. 6 23
848 18.86 temperature 25.0 14400 > th dose independent no NA NA
880 18.86 temperature 25.0 14400 > th dose independent rect. 17 23