Os05g0527700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os05g0527700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 334.59 | 0.859 | 7.39 | 0.999 | 1.15 | -1.77 | 1.48 | -2.26 | -0.218 | 6.44 | 21.52 | 1564 | -- | -- |
| 342.68 | 0.862 | 7.31 | 1.46 | 1.16 | -1.51 | 1.47 | -- | -0.0671 | 6.41 | 22.1 | 1517 | -- | -- |
| 339.82 | 0.859 | 7.4 | 1.01 | 1.16 | -1.81 | -- | -2.36 | -0.227 | 6.31 | 21.5 | 1570 | -- | -- |
| 348.57 | 0.87 | 7.31 | 1.49 | 1.18 | -1.5 | -- | -- | -0.0705 | 6.26 | 22.13 | 1501 | -- | -- |
| 404.09 | 0.936 | 7.42 | 1.11 | -- | -1.8 | -- | -2.24 | -0.182 | -- | 21.55 | 1836 | -- | -- |
| 424.7 | 0.966 | 7.42 | 0.914 | 1.14 | -- | 1.56 | -- | -0.555 | 6.45 | -- | -- | -- | -- |
| 430.71 | 0.972 | 7.43 | 0.934 | 1.15 | -- | -- | -- | -0.561 | 6.34 | -- | -- | -- | -- |
| 398.64 | 0.93 | 7.32 | 1.29 | -- | -1.26 | -- | -- | 0.0438 | -- | 24.6 | 336 | -- | -- |
| 399.83 | 0.931 | 7.37 | -- | 1.2 | -1.13 | -- | -- | -0.32 | 6.1 | 22.34 | 1405 | -- | -- |
| 498.8 | 1.04 | 7.45 | 0.965 | -- | -- | -- | -- | -0.536 | -- | -- | -- | -- | -- |
| 453.71 | 0.996 | 7.45 | -- | 1.16 | -- | -- | -- | -0.665 | 6.3 | -- | -- | -- | -- |
| 443.71 | 0.981 | 7.37 | -- | -- | -1.07 | -- | -- | -0.18 | -- | 24.87 | 333 | -- | -- |
| 523.34 | 1.07 | 7.47 | -- | -- | -- | -- | -- | -0.643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 340.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 341.30 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 3 | 343.06 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 6 | 343.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 15 | 344.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 30 | 345.03 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 34 | 345.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 55 | 345.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 69 | 345.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 105 | 346.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 126 | 347.25 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 138 | 347.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 157 | 347.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 158 | 347.93 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 163 | 348.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 168 | 348.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 193 | 348.58 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 220 | 348.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 221 | 348.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 248 | 349.30 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 304 | 349.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 306 | 349.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 307 | 349.90 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 353 | 350.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 358 | 350.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 448 | 350.94 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 501 | 351.38 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 580 | 352.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 628 | 352.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 629 | 352.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 670 | 352.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 686 | 352.96 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 739 | 353.48 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 793 | 353.85 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 812 | 353.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 850 | 354.23 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 873 | 354.34 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 19 |
| 874 | 354.35 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 881 | 354.40 | wind | 3 | 14400 | < th | dose independent | rect. | 6 | 1 |