Os05g0526200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0526200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.43 | 0.237 | 14.1 | -0.0526 | 0.452 | 0.541 | -0.0977 | 0.347 | -0.182 | 23.4 | 20.75 | 977 | -- | -- |
| 25.74 | 0.236 | 14.1 | -0.103 | 0.449 | 0.509 | 0.0145 | -- | -0.182 | 23.2 | 20.8 | 995 | -- | -- |
| 25.46 | 0.235 | 14.1 | -0.0575 | 0.453 | 0.539 | -- | 0.307 | -0.184 | 23.3 | 20.7 | 983 | -- | -- |
| 25.71 | 0.236 | 14.1 | -0.119 | 0.458 | 0.515 | -- | -- | -0.193 | 23.3 | 20.8 | 998 | -- | -- |
| 37.5 | 0.285 | 14.1 | -0.0811 | -- | 0.678 | -- | 0.368 | -0.208 | -- | 20.7 | 901 | -- | -- |
| 32.91 | 0.269 | 14 | 0.0799 | 0.525 | -- | -0.0561 | -- | -0.0759 | 23.3 | -- | -- | -- | -- |
| 32.92 | 0.269 | 14 | 0.0823 | 0.526 | -- | -- | -- | -0.0756 | 23.3 | -- | -- | -- | -- |
| 37.89 | 0.287 | 14.1 | -0.158 | -- | 0.635 | -- | -- | -0.229 | -- | 20.89 | 902 | -- | -- |
| 26.04 | 0.238 | 14.1 | -- | 0.46 | 0.469 | -- | -- | -0.175 | 23.3 | 20.8 | 991 | -- | -- |
| 50.22 | 0.331 | 14 | 0.0957 | -- | -- | -- | -- | -0.0705 | -- | -- | -- | -- | -- |
| 33.1 | 0.269 | 14.1 | -- | 0.527 | -- | -- | -- | -0.0847 | 23.3 | -- | -- | -- | -- |
| 38.45 | 0.289 | 14.1 | -- | -- | 0.578 | -- | -- | -0.198 | -- | 20.8 | 887 | -- | -- |
| 50.47 | 0.332 | 14 | -- | -- | -- | -- | -- | -0.0811 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.82 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 14 |
| 5 | 21.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 19 | 22.25 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 30 | 22.55 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 41 | 22.82 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 49 | 22.90 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 54 | 22.96 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 13 |
| 61 | 23.03 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 62 | 23.06 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 66 | 23.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 70 | 23.13 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 72 | 23.15 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 97 | 23.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 15 |
| 136 | 23.51 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 147 | 23.56 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 7 |
| 173 | 23.72 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |
| 297 | 24.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 321 | 24.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 487 | 24.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 844 | 25.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 850 | 25.26 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 925 | 25.37 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 21 |