Os05g0521400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0521400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.71 | 0.311 | 9.68 | -0.256 | 0.691 | -0.73 | -0.709 | 1.49 | -0.0762 | 5 | 24.8 | 4623 | -- | -- |
| 43.57 | 0.307 | 9.65 | -0.0909 | 0.684 | -0.729 | -0.59 | -- | -0.0909 | 4.93 | 21.59 | 7078 | -- | -- |
| 44.98 | 0.312 | 9.68 | -0.264 | 0.683 | -0.735 | -- | 1.53 | -0.0755 | 4.94 | 24.76 | 4586 | -- | -- |
| 44.75 | 0.312 | 9.65 | -0.107 | 0.678 | -0.748 | -- | -- | -0.0888 | 4.92 | 21.44 | 7038 | -- | -- |
| 67.81 | 0.384 | 9.7 | -0.325 | -- | -0.809 | -- | 1.81 | -0.11 | -- | 24.59 | 4214 | -- | -- |
| 56.49 | 0.352 | 9.59 | 0.42 | 0.704 | -- | -0.703 | -- | 0.182 | 4.89 | -- | -- | -- | -- |
| 57.75 | 0.356 | 9.59 | 0.422 | 0.699 | -- | -- | -- | 0.186 | 4.81 | -- | -- | -- | -- |
| 69.14 | 0.387 | 9.66 | -0.105 | -- | -0.776 | -- | -- | -0.0949 | -- | 21.5 | 6970 | -- | -- |
| 44.93 | 0.312 | 9.64 | -- | 0.681 | -0.707 | -- | -- | -0.0644 | 4.94 | 21.6 | 6849 | -- | -- |
| 83.56 | 0.427 | 9.59 | 0.448 | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
| 62.45 | 0.37 | 9.6 | -- | 0.706 | -- | -- | -- | 0.139 | 4.79 | -- | -- | -- | -- |
| 69.3 | 0.388 | 9.65 | -- | -- | -0.734 | -- | -- | -0.0602 | -- | 21.6 | 6963 | -- | -- |
| 88.86 | 0.44 | 9.61 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.46 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 3 | 41.85 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 5 | 41.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 9 | 42.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 11 | 42.15 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 13 | 42.22 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 24 | 5 |
| 16 | 42.28 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 25 | 42.35 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 26 | 42.35 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 27 | 42.35 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 28 | 42.36 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 29 | 42.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 68 | 42.53 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 77 | 42.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 95 | 42.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 131 | 42.73 | humidity | 90.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 135 | 42.73 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 138 | 42.75 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 140 | 42.75 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 153 | 42.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 156 | 42.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 157 | 42.79 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 158 | 42.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 159 | 42.79 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 184 | 42.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 197 | 42.87 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 200 | 42.87 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 202 | 42.88 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 210 | 42.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 230 | 42.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 236 | 42.93 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 4 |
| 245 | 42.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 246 | 42.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 249 | 42.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 250 | 42.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 4 |
| 271 | 42.98 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 273 | 42.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 279 | 42.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 19 |
| 283 | 42.99 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 310 | 43.01 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 17 |
| 314 | 43.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 343 | 43.04 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 4 |
| 426 | 43.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 14 | 13 |
| 438 | 43.11 | temperature | 30.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 446 | 43.12 | humidity | 90.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 455 | 43.12 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 491 | 43.15 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 546 | 43.18 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 10 |
| 552 | 43.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 22 |
| 575 | 43.20 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 592 | 43.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 595 | 43.21 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 606 | 43.22 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 631 | 43.24 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 632 | 43.24 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 650 | 43.25 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 670 | 43.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 23 |
| 697 | 43.27 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 703 | 43.27 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 804 | 43.32 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 826 | 43.33 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 827 | 43.33 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 839 | 43.34 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 856 | 43.35 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 878 | 43.36 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 900 | 43.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 941 | 43.38 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 956 | 43.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 991 | 43.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |