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Os05g0519900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Itm1 protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0165) R2 : 0.329
β1 : 0.836 (0.0603) R2dD : 0.293 R2D : 0.198
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.286 (0.0352) R2dN8 : 0.131 R2N8 : 0.0357
σ : 0.309
deviance : 43.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
31.76 0.265 10.3 0.854 0.393 0.521 -0.0209 -1.74 0.333 21.9 93.88 329 -- --
33.73 0.271 10.3 0.843 0.395 0.708 0.123 -- 0.334 21.8 94.7 305 -- --
31.75 0.262 10.3 0.858 0.392 0.518 -- -1.77 0.332 22 93.96 328 -- --
33.82 0.271 10.3 0.827 0.394 0.743 -- -- 0.317 21.9 94.74 305 -- --
40.16 0.295 10.2 0.853 -- 0.407 -- -2.41 0.311 -- 94.69 300 -- --
35.98 0.281 10.3 0.836 0.354 -- 0.17 -- 0.285 22.7 -- -- -- --
36.09 0.281 10.3 0.829 0.354 -- -- -- 0.285 22.7 -- -- -- --
42.41 0.303 10.2 0.836 -- 0.602 -- -- 0.303 -- 94.9 172 -- --
51.77 0.335 10.3 -- 0.406 0.773 -- -- 0.276 21.6 94.36 276 -- --
43.81 0.309 10.3 0.836 -- -- -- -- 0.286 -- -- -- -- --
54.22 0.344 10.3 -- 0.36 -- -- -- 0.192 22.8 -- -- -- --
60.25 0.362 10.3 -- -- 0.511 -- -- 0.223 -- 94.54 30 -- --
62.24 0.368 10.3 -- -- -- -- -- 0.194 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.32 radiation 1 1440 < th dose independent rect. 11 1
2 31.32 radiation 1 1440 < th dose dependent rect. 11 1
3 31.83 radiation 1 1440 > th dose independent rect. 12 1
4 31.97 wind 1 1440 > th dose independent rect. 23 2
18 32.38 humidity 90 720 > th dose independent rect. 5 1
35 32.46 radiation 10 1440 < th dose dependent rect. 11 6
45 32.51 humidity 90 720 > th dose independent rect. 21 13
77 32.63 radiation 20 1440 < th dose independent rect. 14 3
82 32.64 wind 1 43200 > th dose independent rect. 22 14
86 32.65 humidity 90 720 < th dose independent rect. 20 16
87 32.65 radiation 10 1440 < th dose dependent rect. 11 19
88 32.66 humidity 90 720 > th dose independent sin 8 NA
97 32.67 humidity 90 14400 > th dose dependent rect. 6 1
105 32.68 radiation 20 1440 < th dose independent rect. 14 11
110 32.68 humidity 90 720 > th dose dependent rect. 20 10
114 32.69 wind 1 43200 > th dose independent rect. 3 9
124 32.70 radiation 20 4320 > th dose independent rect. 16 16
127 32.72 wind 1 43200 > th dose independent sin 6 NA
130 32.72 radiation 10 4320 > th dose independent rect. 15 18
136 32.74 temperature 20 720 < th dose independent rect. 3 2
137 32.74 wind 1 43200 > th dose independent rect. 17 18
138 32.74 wind 1 43200 > th dose independent rect. 12 20
140 32.75 temperature 20 720 > th dose independent rect. 5 1
147 32.75 humidity 90 14400 > th dose dependent rect. 6 9
160 32.78 radiation 20 1440 < th dose independent rect. 12 5
178 32.79 radiation 20 1440 < th dose independent sin 15 NA
184 32.79 radiation 20 1440 < th dose independent rect. 12 13
193 32.79 humidity 90 720 > th dose dependent rect. 20 14
194 32.79 radiation 10 1440 < th dose dependent rect. 11 14
199 32.79 atmosphere 995 43200 < th dose dependent rect. 11 19
219 32.81 wind 1 1440 < th dose independent rect. 23 2
243 32.83 temperature 25 90 > th dose independent rect. 17 14
253 32.83 humidity 90 270 > th dose dependent rect. 4 23
266 32.85 wind 1 43200 < th dose independent rect. 22 15
305 32.86 wind 1 43200 < th dose independent rect. 11 21
311 32.86 atmosphere 995 43200 < th dose dependent rect. 12 15
314 32.87 humidity 90 720 < th dose independent sin 8 NA
318 32.87 wind 1 43200 < th dose independent rect. 20 17
322 32.87 humidity 50 14400 > th dose dependent rect. 6 2
328 32.87 humidity 90 270 > th dose dependent rect. 21 21
345 32.88 wind 1 43200 < th dose independent rect. 17 19
365 32.89 wind 1 14400 > th dose independent rect. 23 6
386 32.90 temperature 20 720 < th dose independent rect. 23 7
420 32.91 humidity 90 270 > th dose dependent rect. 16 20
428 32.92 humidity 90 14400 > th dose independent rect. 6 1
429 32.92 radiation 10 4320 > th dose independent rect. 17 1
476 32.93 humidity 90 270 > th dose dependent no NA NA
495 32.93 humidity 90 270 > th dose dependent rect. 11 23
544 32.96 atmosphere 995 43200 > th dose independent rect. 21 17
550 32.96 humidity 80 720 > th dose dependent rect. 5 1
564 32.96 humidity 90 270 > th dose dependent rect. 8 23
574 32.97 atmosphere 995 43200 < th dose dependent rect. 13 12
584 32.98 atmosphere 995 43200 < th dose independent rect. 21 17
603 32.99 radiation 30 1440 > th dose independent rect. 15 2
629 32.99 humidity 90 720 > th dose dependent sin 10 NA
631 32.99 radiation 10 1440 < th dose dependent sin 18 NA
633 32.99 humidity 80 1440 > th dose dependent rect. 1 5
649 33.00 wind 1 14400 > th dose independent rect. 22 9
700 33.02 humidity 90 43200 > th dose independent rect. 15 1
723 33.02 atmosphere 995 43200 < th dose dependent sin 16 NA
726 33.02 humidity 50 1440 > th dose dependent rect. 1 5
747 33.03 wind 3 43200 < th dose dependent rect. 4 1
761 33.04 humidity 90 14400 < th dose independent rect. 6 1
802 33.05 humidity 80 1440 > th dose dependent rect. 3 3
811 33.05 humidity 90 270 > th dose dependent rect. 1 23
832 33.06 radiation 40 4320 < th dose dependent rect. 17 1
833 33.06 humidity 50 1440 > th dose dependent rect. 3 3
836 33.06 humidity 90 720 > th dose dependent rect. 20 5
847 33.07 atmosphere 995 43200 < th dose independent sin 6 NA
859 33.07 atmosphere 1005 30 > th dose independent rect. 18 14
869 33.07 wind 1 14400 < th dose dependent rect. 6 1
870 33.07 radiation 20 4320 < th dose dependent rect. 17 1
872 33.07 humidity 90 43200 > th dose dependent rect. 15 2
906 33.08 radiation 1 1440 > th dose independent rect. 11 19
913 33.08 humidity 90 14400 > th dose dependent rect. 13 1
923 33.08 wind 1 43200 < th dose dependent rect. 3 21
926 33.09 atmosphere 995 43200 > th dose independent sin 6 NA
927 33.09 humidity 90 720 > th dose independent rect. 3 4
929 33.09 humidity 90 1440 < th dose independent rect. 24 6
967 33.10 radiation 1 4320 > th dose dependent rect. 17 1
998 33.11 temperature 20 720 > th dose independent rect. 23 7