Os05g0514600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os05g0514600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1172 | 1.61 | 7.33 | -7.14 | 3.42 | 6.67 | -1.38 | -14.7 | -1.39 | 9.59 | 25.3 | 1275 | 5.05 | 11.1 |
| 1296.87 | 1.68 | 6.96 | -3.43 | 3.57 | 5.23 | -0.665 | -- | -0.819 | 9.66 | 24.47 | 1268 | 5.28 | 10.3 |
| 1178.79 | 1.6 | 7.31 | -7.03 | 3.45 | 6.66 | -- | -14.2 | -1.36 | 9.59 | 25.32 | 1269 | 5.1 | 11.2 |
| 1272.88 | 1.66 | 6.94 | -3.15 | 3.48 | 5.3 | -- | -- | -0.502 | 9.54 | 25.3 | 1259 | 5.62 | 10.4 |
| 1717.87 | 1.93 | 7.37 | -7.17 | -- | 5.96 | -- | -13.9 | -1.21 | -- | 25.6 | 1439 | 5.63 | 11.7 |
| 2397.24 | 2.3 | 6.68 | -1.22 | 2.6 | -- | -1.37 | -- | 0.3 | 8.81 | -- | -- | -- | -- |
| 2403.5 | 2.3 | 6.68 | -1.27 | 2.61 | -- | -- | -- | 0.298 | 8.75 | -- | -- | -- | -- |
| 1770.29 | 1.96 | 6.81 | -3.01 | -- | 4.58 | -- | -- | 0.0808 | -- | 26.4 | 1431 | 7.28 | 11.7 |
| 1471.91 | 1.79 | 6.64 | -- | 3.02 | 4.53 | -- | -- | 0.615 | 9.96 | 27.28 | 1183 | 10.9 | 7.58 |
| 2790.17 | 2.47 | 6.75 | -1.26 | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
| 2445.74 | 2.31 | 6.65 | -- | 2.61 | -- | -- | -- | 0.439 | 8.79 | -- | -- | -- | -- |
| 1971.34 | 2.07 | 6.71 | -- | -- | 4.1 | -- | -- | 0.527 | -- | 26.9 | 1388 | 8.5 | 14.8 |
| 2832.19 | 2.48 | 6.72 | -- | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1254.55 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 22 | 1260.90 | temperature | 25 | 1440 | > th | dose dependent | sin | 1 | NA |
| 83 | 1271.67 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 9 |
| 89 | 1271.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 91 | 1272.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 99 | 1272.09 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 9 |
| 103 | 1272.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 105 | 1272.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 111 | 1272.62 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 15 |
| 125 | 1273.51 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 127 | 1273.60 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 145 | 1274.32 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 160 | 1274.67 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 194 | 1276.10 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 242 | 1277.66 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 252 | 1278.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 322 | 1280.07 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 343 | 1281.47 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 454 | 1284.65 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 459 | 1284.72 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 464 | 1284.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 592 | 1290.06 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 22 |
| 602 | 1290.41 | temperature | 25 | 14400 | > th | dose dependent | rect. | 2 | 22 |
| 620 | 1290.73 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 644 | 1291.09 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 655 | 1291.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 711 | 1292.12 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 753 | 1292.49 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 755 | 1292.49 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 757 | 1292.50 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 758 | 1292.50 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 759 | 1292.51 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 764 | 1292.51 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 23 |
| 767 | 1292.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 21 |
| 769 | 1292.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 21 |
| 779 | 1292.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 793 | 1292.58 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 798 | 1292.59 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 814 | 1292.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 935 | 1295.64 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 937 | 1295.81 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |