Os05g0514500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
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Os05g0514500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Prefoldin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 183.73 | 0.637 | 3.28 | -0.679 | 0.0232 | -0.797 | 0.764 | 1.53 | 0.225 | 6.81 | 89.72 | 5043 | -- | -- |
| 186.54 | 0.636 | 3.25 | -0.904 | 0.00519 | -0.89 | 0.568 | -- | 0.229 | 6.83 | 89.99 | 5036 | -- | -- |
| 184.79 | 0.633 | 3.28 | -0.701 | 0.042 | -0.816 | -- | 1.54 | 0.207 | 5.39 | 90 | 5126 | -- | -- |
| 187.42 | 0.638 | 3.25 | -0.908 | 0.0111 | -0.9 | -- | -- | 0.226 | 5.52 | 89.87 | 5039 | -- | -- |
| 184.88 | 0.633 | 3.28 | -0.704 | -- | -0.826 | -- | 1.53 | 0.211 | -- | 90.13 | 5125 | -- | -- |
| 197.07 | 0.658 | 3.32 | -0.762 | 0.107 | -- | 0.672 | -- | -0.0973 | 6.66 | -- | -- | -- | -- |
| 198.13 | 0.659 | 3.32 | -0.75 | 0.114 | -- | -- | -- | -0.0986 | 7.9 | -- | -- | -- | -- |
| 187.42 | 0.638 | 3.25 | -0.903 | -- | -0.886 | -- | -- | 0.215 | -- | 89.83 | 5039 | -- | -- |
| 207.75 | 0.671 | 3.26 | -- | 0.0372 | -0.613 | -- | -- | 0.206 | 5.64 | 89.78 | 5151 | -- | -- |
| 198.83 | 0.659 | 3.32 | -0.749 | -- | -- | -- | -- | -0.0971 | -- | -- | -- | -- | -- |
| 212.96 | 0.683 | 3.3 | -- | 0.109 | -- | -- | -- | -0.0151 | 8.38 | -- | -- | -- | -- |
| 207.83 | 0.671 | 3.25 | -- | -- | -0.606 | -- | -- | 0.217 | -- | 90 | 4982 | -- | -- |
| 213.62 | 0.682 | 3.3 | -- | -- | -- | -- | -- | -0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.56 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 2 | 176.73 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 3 | 177.67 | wind | 3.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 5 | 177.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 8 | 178.31 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 10 | 178.66 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 11 | 178.71 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 12 | 178.72 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 27 | 178.73 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 35 | 179.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 36 | 179.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 38 | 179.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 44 | 179.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 47 | 179.77 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 62 | 179.79 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 64 | 179.81 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 65 | 179.82 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 72 | 179.98 | wind | 1.0 | 14400 | > th | dose independent | rect. | 13 | 13 |
| 74 | 180.09 | wind | 1.0 | 14400 | < th | dose independent | rect. | 13 | 13 |
| 75 | 180.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 78 | 180.15 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 82 | 180.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 92 | 180.42 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 96 | 180.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 13 |
| 99 | 180.46 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 21 |
| 114 | 180.62 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 116 | 180.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 13 |
| 117 | 180.64 | wind | 3.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 178 | 180.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 21 |
| 188 | 180.97 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 213 | 181.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 244 | 181.19 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 257 | 181.23 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 260 | 181.24 | wind | 3.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 263 | 181.24 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 281 | 181.28 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 299 | 181.33 | wind | 3.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 300 | 181.33 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 302 | 181.33 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 22 |
| 306 | 181.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 13 |
| 313 | 181.38 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 320 | 181.39 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 328 | 181.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 330 | 181.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 11 | 7 |
| 342 | 181.42 | wind | 3.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 358 | 181.44 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 379 | 181.48 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 397 | 181.51 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 411 | 181.53 | wind | 3.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 423 | 181.54 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 469 | 181.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 519 | 181.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 22 |
| 522 | 181.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 526 | 181.66 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 536 | 181.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 22 |
| 594 | 181.77 | wind | 3.0 | 14400 | > th | dose independent | no | NA | NA |
| 599 | 181.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 600 | 181.78 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 647 | 181.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 648 | 181.85 | wind | 3.0 | 14400 | < th | dose independent | no | NA | NA |
| 700 | 181.91 | wind | 3.0 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 717 | 181.94 | wind | 7.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 728 | 181.94 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 742 | 181.95 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 23 |
| 755 | 181.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 762 | 181.97 | wind | 3.0 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 794 | 182.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 815 | 182.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 860 | 182.09 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 869 | 182.10 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 876 | 182.11 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 933 | 182.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 938 | 182.21 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 948 | 182.22 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 12 | 5 |