Os05g0513900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl aminopeptidase) (PAP).
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Os05g0513900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Proline iminopeptidase (EC 3.4.11.5) (PIP) (Prolyl aminopeptidase) (PAP).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.63 | 0.414 | 11.8 | 0.44 | 0.666 | 1.18 | -0.596 | 0.191 | -0.202 | 12.8 | 80 | 1402 | -- | -- |
| 77.06 | 0.409 | 11.8 | 0.388 | 0.678 | 1.22 | -0.606 | -- | -0.198 | 12.8 | 79 | 1371 | -- | -- |
| 78.47 | 0.413 | 11.8 | 0.39 | 0.692 | 1.23 | -- | 0.072 | -0.192 | 12.8 | 78.7 | 1378 | -- | -- |
| 78.47 | 0.413 | 11.8 | 0.381 | 0.685 | 1.23 | -- | -- | -0.195 | 12.8 | 78.01 | 1383 | -- | -- |
| 97.47 | 0.462 | 11.8 | 0.36 | -- | 0.467 | -- | -0.509 | -0.137 | -- | 78.7 | 1378 | -- | -- |
| 94.82 | 0.457 | 11.8 | 0.465 | 0.644 | -- | -0.703 | -- | -0.136 | 12.6 | -- | -- | -- | -- |
| 96.93 | 0.461 | 11.8 | 0.438 | 0.645 | -- | -- | -- | -0.14 | 12.5 | -- | -- | -- | -- |
| 99.14 | 0.466 | 11.8 | 0.375 | -- | 0.464 | -- | -- | -0.133 | -- | 78.7 | 1378 | -- | -- |
| 81.9 | 0.422 | 11.8 | -- | 0.689 | 1.25 | -- | -- | -0.237 | 12.8 | 77.99 | 1373 | -- | -- |
| 123.06 | 0.518 | 11.8 | 0.416 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 101.99 | 0.472 | 11.8 | -- | 0.639 | -- | -- | -- | -0.188 | 12.5 | -- | -- | -- | -- |
| 102.65 | 0.473 | 11.8 | -- | -- | 0.475 | -- | -- | -0.18 | -- | 78 | 1574 | -- | -- |
| 127.63 | 0.527 | 11.8 | -- | -- | -- | -- | -- | -0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.07 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 4 | 70.80 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 5 | 70.91 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 9 | 71.03 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 19 | 71.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 44 | 71.52 | humidity | 80.0 | 1440 | < th | dose independent | sin | 3 | NA |
| 47 | 71.53 | humidity | 80.0 | 1440 | > th | dose independent | sin | 2 | NA |
| 53 | 71.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 90 | 72.13 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 106 | 72.31 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 150 | 73.46 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 212 | 74.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 224 | 75.01 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 240 | 75.23 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 276 | 75.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 290 | 75.87 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 291 | 75.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 317 | 76.21 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 320 | 76.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 13 |
| 337 | 76.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 339 | 76.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 347 | 76.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 348 | 76.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 352 | 76.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 379 | 76.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 385 | 76.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 394 | 76.76 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 418 | 76.84 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 3 |
| 430 | 76.88 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 7 | 15 |
| 436 | 76.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 443 | 76.94 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 449 | 76.95 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 9 |
| 453 | 76.95 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 462 | 76.98 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 502 | 77.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 512 | 77.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 566 | 77.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 587 | 77.32 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 588 | 77.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 590 | 77.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 600 | 77.35 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 620 | 77.39 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 621 | 77.40 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 622 | 77.40 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 664 | 77.51 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 678 | 77.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 679 | 77.53 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 711 | 77.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 735 | 77.66 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 21 |
| 785 | 77.72 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 790 | 77.73 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 859 | 77.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 22 |
| 878 | 77.84 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 892 | 77.86 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 944 | 77.94 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 974 | 77.98 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 1000 | 78.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 9 |