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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os05g0513600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.17 (0.018) R2 : 0.000715
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0216 (0.0378) R2dN8 : 0.000924 R2N8 : 0.000715
σ : 0.338
deviance : 52.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.65 0.331 3.18 0.167 0.127 0.225 0.163 0.997 -0.0438 7.67 90.99 4873 -- --
50.9 0.332 3.18 0.102 0.108 0.278 0.0105 -- -0.0764 7.13 101.9 4412 -- --
49.45 0.328 3.18 0.175 0.105 0.215 -- 1.05 -0.0427 7.3 90.99 5900 -- --
50.89 0.332 3.18 0.101 0.109 0.275 -- -- -0.0733 6.82 103 4450 -- --
50.01 0.329 3.18 0.174 -- 0.217 -- 1.04 -0.0393 -- 90.29 5854 -- --
51.8 0.337 3.16 0.0882 0.102 -- 0.0211 -- -0.0133 7.31 -- -- -- --
51.8 0.337 3.16 0.0886 0.102 -- -- -- -0.0134 7.2 -- -- -- --
51.47 0.334 3.18 0.105 -- 0.272 -- -- -0.0715 -- 105.1 4340 -- --
51.16 0.333 3.18 -- 0.109 0.263 -- -- -0.0811 6.76 167.2 4446 -- --
52.35 0.338 3.17 0.0904 -- -- -- -- -0.0116 -- -- -- -- --
52.01 0.337 3.17 -- 0.103 -- -- -- -0.0232 7.14 -- -- -- --
51.67 0.335 3.18 -- -- 0.261 -- -- -0.0701 -- 88 4342 -- --
52.57 0.338 3.17 -- -- -- -- -- -0.0216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 45.66 atmosphere 1000.0 30 > th dose independent rect. 3 23
3 45.91 atmosphere 1005.0 90 > th dose dependent rect. 2 1
5 46.14 radiation 1.0 43200 < th dose dependent rect. 3 1
7 46.32 atmosphere 1005.0 10 > th dose dependent rect. 2 2
19 46.53 wind 9.0 1440 < th dose independent rect. 3 1
20 46.53 temperature 20.0 30 > th dose independent rect. 2 1
21 46.53 temperature 10.0 1440 > th dose independent rect. 3 1
24 46.53 temperature 30.0 1440 < th dose independent rect. 3 1
28 46.53 humidity 50.0 1440 > th dose independent rect. 3 1
37 46.53 atmosphere 995.0 1440 > th dose independent rect. 3 1
38 46.53 radiation 1.0 1440 < th dose independent rect. 3 1
58 46.53 temperature 10.0 1440 > th dose independent rect. 4 23
61 46.53 temperature 20.0 30 > th dose dependent rect. 2 1
73 46.56 atmosphere 1000.0 30 > th dose independent rect. 2 1
76 46.57 wind 3.0 30 < th dose independent rect. 2 1
78 46.57 atmosphere 995.0 30 > th dose dependent rect. 2 1
82 46.58 wind 7.0 30 < th dose dependent rect. 2 1
87 46.60 temperature 10.0 30 > th dose independent rect. 2 1
89 46.60 temperature 30.0 30 < th dose independent rect. 2 1
90 46.60 humidity 50.0 30 > th dose independent rect. 2 1
94 46.60 atmosphere 1010.0 30 < th dose independent rect. 2 1
96 46.60 radiation 1.0 30 < th dose independent rect. 2 1
101 46.60 precipitation 0.1 30 < th dose independent rect. 2 1
102 46.60 temperature 10.0 30 > th dose independent rect. 3 23
104 46.60 humidity 50.0 30 > th dose dependent rect. 2 1
108 46.60 radiation 1.0 30 < th dose dependent rect. 2 1
113 46.60 precipitation 0.1 30 < th dose dependent rect. 2 1
120 46.65 atmosphere 1015.0 30 < th dose dependent rect. 2 1
124 46.70 wind 1.0 30 > th dose independent rect. 2 1
126 46.70 temperature 30.0 30 < th dose dependent rect. 2 1
145 46.83 precipitation 0.1 30 < th dose independent rect. 3 23
146 46.83 precipitation 0.1 30 < th dose dependent rect. 3 23
194 47.33 wind 9.0 30 < th dose independent rect. 3 23
232 47.84 humidity 50.0 30 > th dose independent rect. 3 23
241 47.98 humidity 90.0 90 < th dose independent rect. 2 1
280 48.65 humidity 90.0 90 < th dose independent rect. 1 3
289 48.81 atmosphere 1000.0 720 > th dose independent rect. 3 8
291 48.81 humidity 80.0 14400 < th dose dependent rect. 3 6
330 48.93 wind 1.0 10 < th dose independent rect. 13 14
339 48.96 wind 1.0 10 < th dose independent rect. 17 10
343 48.97 wind 1.0 10 < th dose independent rect. 21 6
353 49.00 atmosphere 1000.0 10 > th dose independent rect. 21 23
358 49.04 atmosphere 995.0 720 > th dose independent rect. 23 16
367 49.08 wind 1.0 10 > th dose independent rect. 21 23
372 49.12 wind 1.0 14400 < th dose dependent rect. 6 1
379 49.19 humidity 80.0 14400 < th dose dependent rect. 21 13
380 49.20 humidity 70.0 14400 > th dose independent rect. 8 1
410 49.23 atmosphere 995.0 1440 > th dose independent rect. 3 12
429 49.27 wind 1.0 10 < th dose independent rect. 6 21
442 49.32 radiation 10.0 30 < th dose independent rect. 3 23
456 49.35 humidity 70.0 14400 > th dose independent rect. 6 4
457 49.35 humidity 70.0 14400 > th dose independent rect. 4 5
462 49.35 humidity 70.0 14400 > th dose independent rect. 1 8
474 49.36 humidity 70.0 14400 < th dose independent rect. 8 1
487 49.37 wind 1.0 14400 > th dose independent rect. 4 3
488 49.37 wind 1.0 14400 < th dose independent rect. 4 3
489 49.37 humidity 70.0 14400 < th dose independent rect. 7 3
493 49.37 atmosphere 1000.0 720 > th dose independent rect. 3 6
506 49.37 temperature 25.0 720 > th dose dependent rect. 3 5
513 49.39 wind 1.0 14400 < th dose dependent rect. 4 3
520 49.41 atmosphere 1000.0 720 > th dose independent rect. 21 18
551 49.44 atmosphere 1000.0 10 > th dose independent rect. 2 12
553 49.44 temperature 30.0 30 < th dose independent rect. 3 23
559 49.45 temperature 30.0 720 < th dose independent rect. 15 22
573 49.48 atmosphere 1015.0 30 < th dose independent rect. 3 23
581 49.49 temperature 10.0 30 > th dose dependent rect. 3 23
587 49.52 humidity 50.0 4320 > th dose dependent rect. 11 2
590 49.53 humidity 90.0 10 > th dose independent rect. 24 3
599 49.54 atmosphere 995.0 720 > th dose independent rect. 15 23
603 49.55 humidity 70.0 4320 > th dose independent rect. 10 1
604 49.55 precipitation 0.1 720 < th dose independent rect. 15 8
605 49.55 radiation 40.0 30 < th dose independent rect. 14 12
606 49.55 humidity 90.0 4320 < th dose dependent rect. 11 2
608 49.55 precipitation 0.1 720 < th dose dependent rect. 15 8
610 49.55 humidity 90.0 4320 < th dose dependent rect. 23 16
621 49.56 atmosphere 1000.0 10 > th dose independent rect. 14 12
623 49.56 temperature 20.0 30 > th dose dependent rect. 3 4
634 49.57 humidity 50.0 4320 > th dose dependent rect. 23 16
640 49.58 radiation 1.0 1440 < th dose dependent rect. 21 1
644 49.58 humidity 50.0 4320 > th dose dependent rect. 3 12
659 49.60 humidity 60.0 10 > th dose independent rect. 14 12
663 49.60 humidity 90.0 4320 < th dose dependent rect. 3 12
672 49.61 humidity 70.0 4320 < th dose independent rect. 10 1
688 49.62 temperature 30.0 720 < th dose independent rect. 15 6
694 49.62 wind 1.0 14400 < th dose dependent rect. 2 6
707 49.63 atmosphere 995.0 720 > th dose independent rect. 3 23
728 49.64 temperature 20.0 30 > th dose independent rect. 3 4
729 49.64 humidity 50.0 4320 > th dose dependent sin 5 NA
730 49.64 humidity 90.0 4320 < th dose dependent sin 5 NA
771 49.65 temperature 25.0 720 > th dose independent rect. 3 5
772 49.65 temperature 10.0 720 > th dose independent rect. 15 8
775 49.65 temperature 10.0 720 > th dose independent rect. 23 16
800 49.66 humidity 90.0 720 > th dose independent rect. 3 1
803 49.66 temperature 30.0 1440 > th dose independent rect. 15 20
820 49.67 humidity 70.0 4320 > th dose independent sin 5 NA
821 49.67 humidity 70.0 4320 > th dose independent rect. 8 5
823 49.67 humidity 70.0 4320 > th dose independent rect. 5 10
869 49.68 humidity 80.0 4320 < th dose dependent rect. 14 1
870 49.68 humidity 90.0 10 < th dose dependent rect. 20 1
889 49.68 radiation 20.0 30 < th dose dependent rect. 3 23
904 49.69 humidity 80.0 4320 < th dose independent rect. 3 10
914 49.69 temperature 30.0 1440 < th dose independent rect. 15 20
916 49.69 temperature 25.0 4320 > th dose dependent rect. 6 1
936 49.69 radiation 40.0 10 < th dose dependent rect. 14 12
961 49.71 temperature 25.0 720 > th dose independent rect. 4 3
965 49.71 humidity 70.0 4320 < th dose independent rect. 8 7
971 49.71 atmosphere 1000.0 10 > th dose independent rect. 2 14
972 49.71 atmosphere 1000.0 30 > th dose independent rect. 4 15
976 49.71 humidity 80.0 720 > th dose dependent rect. 3 1