Os05g0499500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0499500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.86 | 0.44 | 10.2 | -2.83 | 0.688 | 1.79 | -0.0245 | -2.94 | -0.479 | 5.22 | 14.16 | 639 | -- | -- |
| 93.93 | 0.451 | 10.2 | -2.32 | 0.628 | 1.73 | 0.376 | -- | -0.34 | 5.48 | 13.8 | 710 | -- | -- |
| 87.84 | 0.437 | 10.2 | -2.81 | 0.709 | 1.8 | -- | -2.93 | -0.478 | 5.15 | 14.2 | 615 | -- | -- |
| 94.29 | 0.452 | 10.2 | -2.32 | 0.627 | 1.72 | -- | -- | -0.34 | 5.4 | 13.96 | 712 | -- | -- |
| 93.53 | 0.45 | 10.2 | -2.85 | -- | 1.66 | -- | -2.35 | -0.486 | -- | 11.68 | 1144 | -- | -- |
| 131.17 | 0.537 | 10.1 | -1.89 | 0.452 | -- | -0.0953 | -- | -0.0776 | 2.7 | -- | -- | -- | -- |
| 131.2 | 0.536 | 10.1 | -1.89 | 0.452 | -- | -- | -- | -0.0771 | 2.73 | -- | -- | -- | -- |
| 101.41 | 0.469 | 10.2 | -2.43 | -- | 1.43 | -- | -- | -0.36 | -- | 11.9 | 2526 | -- | -- |
| 218.92 | 0.689 | 10.1 | -- | 0.561 | 0.57 | -- | -- | 0.0415 | 3.92 | 19.6 | 466 | -- | -- |
| 143.09 | 0.559 | 10.1 | -1.87 | -- | -- | -- | -- | -0.0656 | -- | -- | -- | -- | -- |
| 225.03 | 0.702 | 10.1 | -- | 0.415 | -- | -- | -- | 0.133 | 2.68 | -- | -- | -- | -- |
| 224.93 | 0.699 | 10 | -- | -- | 0.493 | -- | -- | 0.246 | -- | 30.3 | 2606 | -- | -- |
| 235.09 | 0.716 | 10.1 | -- | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.03 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 2 | 85.04 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 3 | 85.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 5 | 85.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 10 | 86.48 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 11 | 86.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 12 | 86.68 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 25 | 87.10 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 29 | 87.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 31 | 87.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 35 | 87.39 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 39 | 87.41 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 55 | 87.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 59 | 87.81 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 63 | 87.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 66 | 87.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 72 | 88.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 76 | 88.14 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 90 | 88.42 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 95 | 88.49 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 102 | 88.58 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 126 | 88.79 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 132 | 88.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 146 | 88.93 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 167 | 89.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 171 | 89.03 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 191 | 89.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 209 | 89.15 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 210 | 89.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 213 | 89.17 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 220 | 89.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 223 | 89.20 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 236 | 89.23 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 241 | 89.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 262 | 89.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 280 | 89.34 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 333 | 89.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 401 | 89.58 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 464 | 89.71 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 476 | 89.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 502 | 89.76 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 528 | 89.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 529 | 89.80 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 569 | 89.86 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 613 | 89.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 620 | 89.93 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 665 | 89.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 685 | 90.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 712 | 90.03 | wind | 9 | 43200 | > th | dose dependent | sin | 13 | NA |
| 725 | 90.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 794 | 90.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 820 | 90.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 929 | 90.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 12 |