Os05g0498500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os05g0498500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.18 | 0.542 | 6.64 | 0.719 | 0.344 | 0.135 | -0.779 | 6.48 | -0.539 | 13.8 | 30.01 | 876 | -- | -- |
| 137.17 | 0.545 | 6.74 | -0.0303 | 0.349 | 0.716 | -0.962 | -- | -0.654 | 13.6 | 30.4 | 923 | -- | -- |
| 135.33 | 0.542 | 6.62 | 0.794 | 0.361 | 0.115 | -- | 6.75 | -0.505 | 13.9 | 29.9 | 909 | -- | -- |
| 138.52 | 0.548 | 6.74 | -0.169 | 0.371 | 0.793 | -- | -- | -0.576 | 14.2 | 30.4 | 936 | -- | -- |
| 142.68 | 0.556 | 6.63 | 0.756 | -- | 0.0638 | -- | 6.96 | -0.536 | -- | 29.87 | 849 | -- | -- |
| 158.2 | 0.59 | 6.76 | 0.018 | 0.312 | -- | -0.896 | -- | -0.684 | 14.4 | -- | -- | -- | -- |
| 159.97 | 0.592 | 6.77 | -0.00503 | 0.354 | -- | -- | -- | -0.687 | 16 | -- | -- | -- | -- |
| 144.88 | 0.561 | 6.75 | -0.16 | -- | 0.899 | -- | -- | -0.596 | -- | 30.33 | 732 | -- | -- |
| 139.3 | 0.55 | 6.74 | -- | 0.369 | 0.788 | -- | -- | -0.552 | 14.4 | 30.39 | 929 | -- | -- |
| 166.81 | 0.603 | 6.77 | -0.0195 | -- | -- | -- | -- | -0.697 | -- | -- | -- | -- | -- |
| 159.97 | 0.592 | 6.77 | -- | 0.354 | -- | -- | -- | -0.687 | 16 | -- | -- | -- | -- |
| 145.54 | 0.562 | 6.74 | -- | -- | 0.879 | -- | -- | -0.583 | -- | 30.36 | 725 | -- | -- |
| 166.82 | 0.603 | 6.77 | -- | -- | -- | -- | -- | -0.694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.00 | temperature | 30.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 29 | 134.19 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 30 | 134.20 | temperature | 30.0 | 720 | > th | dose independent | sin | 19 | NA |
| 33 | 134.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 67 | 134.38 | temperature | 30.0 | 720 | < th | dose independent | rect. | 10 | 23 |
| 71 | 134.47 | temperature | 30.0 | 720 | > th | dose independent | rect. | 16 | 23 |
| 77 | 134.60 | temperature | 30.0 | 720 | > th | dose independent | no | NA | NA |
| 173 | 134.72 | temperature | 30.0 | 720 | < th | dose independent | no | NA | NA |
| 175 | 134.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 20 | 23 |
| 176 | 134.79 | temperature | 30.0 | 720 | < th | dose independent | sin | 17 | NA |
| 177 | 134.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 6 |
| 178 | 134.84 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 19 |
| 201 | 134.96 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 202 | 134.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 23 |
| 212 | 135.08 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 23 |
| 217 | 135.12 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 23 |
| 238 | 135.29 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 271 | 135.54 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 23 |
| 277 | 135.65 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 297 | 135.69 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 319 | 135.77 | temperature | 30.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 377 | 135.87 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 381 | 135.88 | temperature | 30.0 | 720 | > th | dose dependent | no | NA | NA |
| 479 | 135.92 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 500 | 135.98 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 2 |
| 505 | 136.00 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 8 |
| 536 | 136.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 19 |
| 555 | 136.28 | humidity | 70.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 635 | 136.66 | temperature | 30.0 | 720 | < th | dose independent | rect. | 15 | 13 |
| 651 | 136.75 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 12 |
| 675 | 136.87 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 16 |
| 678 | 136.90 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 720 | 137.17 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 726 | 137.20 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 14 |
| 736 | 137.25 | temperature | 30.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 738 | 137.28 | temperature | 30.0 | 720 | < th | dose independent | sin | 3 | NA |
| 742 | 137.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 744 | 137.31 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 785 | 137.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 10 |
| 791 | 137.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 807 | 137.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 12 |
| 814 | 137.52 | humidity | 70.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 818 | 137.53 | humidity | 60.0 | 720 | > th | dose independent | rect. | 11 | 16 |
| 887 | 137.70 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 14 |
| 943 | 137.88 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 988 | 137.97 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 12 |