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Os05g0496100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.61 (0.0401) R2 : 0.697
β1 : -3.71 (0.147) R2dD : 0.441 R2D : 0.258
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.97 (0.119) R2dE : 0.18 R2E : 0.0758
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.57 (0.0859) R2dN8 : 0.302 R2N8 : 0.0704
σ : 0.749
deviance : 258.48
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 46.92
memory length : 210
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.53
open length of G : 5.8

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
233.56 0.718 9.63 -3.86 0.723 2.44 -4.3 -2.97 -1.59 18.3 49.27 251 2.82 6.13
241.56 0.724 9.61 -3.75 0.541 2.38 -2.78 -- -1.54 17.7 43.88 238 3.08 6.1
252.87 0.741 9.64 -3.66 0.574 2.31 -- 0.116 -1.58 17.5 41.96 257 2.72 6.12
252.33 0.74 9.63 -3.69 0.687 2.44 -- -- -1.57 18 45.42 254 2.77 6.25
259.33 0.75 9.61 -3.69 -- 2.02 -- 0.438 -1.55 -- 40.11 235 3.36 5.7
325.57 0.846 9.55 -3.73 1.21 -- 1.2 -- -1.45 8.03 -- -- -- --
329.56 0.85 9.55 -3.69 1.21 -- -- -- -1.44 8.24 -- -- -- --
258.48 0.749 9.61 -3.71 -- 1.97 -- -- -1.57 -- 46.92 210 3.53 5.8
615.69 1.16 9.55 -- 0.728 2.39 -- -- -1.16 18.2 54.69 232 3.08 6.24
410.39 0.947 9.58 -3.68 -- -- -- -- -1.43 -- -- -- -- --
689.08 1.23 9.46 -- 1.19 -- -- -- -1.03 8.47 -- -- -- --
618.07 1.16 9.52 -- -- 1.92 -- -- -1.15 -- 42.73 182 3.97 5.82
768.52 1.29 9.49 -- -- -- -- -- -1.02 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 237.62 radiation 20.0 10 < th dose independent rect. 5 15
2 238.92 radiation 30.0 270 < th dose independent rect. 2 7
3 239.40 radiation 40.0 270 < th dose dependent rect. 3 6
5 239.65 radiation 30.0 10 < th dose dependent rect. 5 15
10 241.38 wind 9.0 270 < th dose independent rect. 9 17
15 242.21 humidity 50.0 270 > th dose independent rect. 3 15
16 242.30 precipitation 0.1 270 < th dose independent rect. 9 17
17 242.30 precipitation 0.1 270 < th dose dependent rect. 9 17
19 242.67 temperature 10.0 10 > th dose dependent rect. 20 9
21 242.96 radiation 20.0 270 < th dose independent rect. 3 5
22 243.00 atmosphere 995.0 270 > th dose independent rect. 9 17
23 243.20 humidity 60.0 270 > th dose independent rect. 2 7
24 243.29 temperature 30.0 270 < th dose independent rect. 2 7
26 243.62 wind 7.0 270 < th dose independent rect. 2 7
28 243.64 temperature 10.0 270 > th dose independent rect. 2 7
31 243.64 atmosphere 995.0 270 > th dose independent rect. 2 7
32 243.64 atmosphere 1015.0 270 < th dose independent rect. 2 7
33 243.64 temperature 10.0 270 > th dose independent rect. 9 17
34 243.71 precipitation 0.1 270 < th dose independent rect. 2 7
35 243.71 precipitation 0.1 270 < th dose dependent rect. 2 7
38 244.54 wind 9.0 270 < th dose independent rect. 8 19
43 244.78 humidity 50.0 270 > th dose independent rect. 15 16
49 245.59 radiation 20.0 10 < th dose dependent rect. 5 19
50 245.66 temperature 20.0 10 > th dose independent rect. 20 9
51 245.90 radiation 20.0 10 < th dose independent rect. 5 19
55 245.99 precipitation 0.1 270 < th dose independent rect. 8 19
56 245.99 precipitation 0.1 270 < th dose dependent rect. 8 19
59 246.12 humidity 70.0 270 > th dose independent rect. 3 5
69 246.42 atmosphere 995.0 270 > th dose dependent rect. 3 4
70 246.50 atmosphere 995.0 270 > th dose independent rect. 8 19
71 246.53 radiation 40.0 90 < th dose independent rect. 4 7
75 246.76 precipitation 0.1 270 < th dose independent rect. 3 4
76 246.76 precipitation 0.1 270 < th dose dependent rect. 3 4
77 246.77 wind 7.0 270 < th dose independent rect. 3 4
79 246.78 temperature 10.0 270 > th dose independent rect. 3 4
81 246.78 temperature 30.0 270 < th dose independent rect. 3 4
82 246.78 humidity 50.0 270 > th dose independent rect. 3 4
84 246.78 atmosphere 995.0 270 > th dose independent rect. 3 4
85 246.78 atmosphere 1015.0 270 < th dose independent rect. 3 4
87 246.78 temperature 10.0 270 > th dose independent rect. 7 20
91 246.91 humidity 70.0 10 > th dose independent rect. 5 15
116 247.46 humidity 50.0 10 > th dose dependent rect. 5 15
117 247.55 humidity 50.0 30 > th dose independent rect. 5 15
121 247.89 temperature 10.0 90 > th dose dependent rect. 9 19
123 247.99 atmosphere 995.0 270 > th dose dependent rect. 4 2
126 248.26 atmosphere 995.0 270 > th dose dependent rect. 2 6
128 248.30 wind 1.0 270 > th dose independent rect. 2 6
139 248.81 humidity 50.0 270 > th dose dependent rect. 2 7
165 249.99 radiation 1.0 10 < th dose dependent rect. 20 9
166 250.01 humidity 50.0 270 > th dose dependent rect. 3 5
167 250.02 humidity 50.0 10 > th dose dependent rect. 20 9
176 250.34 humidity 50.0 270 > th dose independent rect. 13 9
181 250.37 temperature 30.0 10 < th dose independent rect. 20 9
182 250.37 humidity 50.0 10 > th dose independent rect. 20 9
185 250.37 atmosphere 995.0 10 > th dose independent rect. 20 9
186 250.37 radiation 1.0 10 < th dose independent rect. 20 9
191 250.37 temperature 10.0 10 > th dose independent rect. 5 15
193 250.37 atmosphere 1015.0 10 < th dose independent rect. 5 15
216 250.59 wind 9.0 10 < th dose independent rect. 20 9
259 251.26 precipitation 0.1 10 < th dose independent rect. 5 15
260 251.26 precipitation 0.1 10 < th dose dependent rect. 5 15
264 251.42 temperature 10.0 270 > th dose dependent rect. 4 3
281 252.04 temperature 10.0 270 > th dose dependent rect. 3 5
284 252.10 temperature 10.0 10 > th dose dependent rect. 9 20
296 252.42 precipitation 0.1 30 < th dose independent rect. 20 9
297 252.42 precipitation 0.1 30 < th dose dependent rect. 20 9
306 252.70 wind 9.0 30 < th dose independent rect. 5 15
338 253.82 temperature 30.0 270 < th dose independent rect. 15 16
343 254.14 wind 9.0 10 < th dose dependent rect. 20 9
346 254.22 temperature 20.0 90 > th dose independent rect. 23 5
362 254.57 temperature 10.0 270 > th dose dependent rect. 22 4
382 254.67 radiation 40.0 90 < th dose independent rect. 4 16
422 255.21 atmosphere 1010.0 30 < th dose independent rect. 20 9
441 255.59 wind 9.0 270 < th dose dependent rect. 3 4
454 255.84 temperature 10.0 1440 > th dose independent rect. 21 8
457 255.84 temperature 30.0 1440 < th dose independent rect. 21 8
461 255.84 humidity 50.0 1440 > th dose independent rect. 21 8
467 255.84 atmosphere 995.0 1440 > th dose independent rect. 21 8
468 255.84 radiation 20.0 1440 < th dose independent rect. 21 8
480 255.84 temperature 10.0 1440 > th dose independent rect. 5 16
486 255.91 radiation 1.0 10 < th dose dependent sin 8 NA
491 256.13 radiation 40.0 10 < th dose dependent rect. 5 5
499 256.20 radiation 1.0 10 > th dose independent sin 9 NA
515 256.39 atmosphere 1000.0 90 > th dose independent rect. 11 17
516 256.39 radiation 40.0 270 < th dose dependent rect. 15 16
523 256.47 radiation 1.0 90 < th dose dependent sin 10 NA
544 256.77 wind 9.0 90 < th dose independent rect. 11 17
557 256.83 radiation 20.0 270 < th dose independent rect. 15 16
585 257.30 temperature 20.0 10 > th dose independent rect. 23 6
587 257.32 temperature 10.0 270 > th dose independent rect. 13 9
588 257.32 temperature 10.0 270 > th dose independent rect. 22 15
589 257.32 atmosphere 995.0 270 > th dose independent rect. 22 15
598 257.49 precipitation 0.1 90 < th dose independent rect. 11 17
600 257.49 precipitation 0.1 90 < th dose dependent rect. 11 17
603 257.58 precipitation 0.1 270 < th dose independent rect. 22 15
608 257.58 precipitation 0.1 270 < th dose dependent rect. 22 15
609 257.59 radiation 20.0 10 < th dose dependent sin 21 NA
610 257.61 temperature 10.0 90 > th dose dependent rect. 11 17
638 257.92 wind 9.0 270 < th dose independent rect. 22 15
668 258.04 radiation 40.0 10 < th dose independent rect. 5 5
683 258.15 wind 9.0 10 < th dose independent rect. 9 20
688 258.19 atmosphere 995.0 10 > th dose independent rect. 5 15
694 258.24 wind 1.0 270 > th dose independent rect. 13 9
695 258.28 wind 9.0 90 < th dose dependent rect. 9 19
710 258.40 temperature 10.0 90 > th dose independent rect. 11 17
721 258.54 wind 9.0 270 < th dose dependent rect. 2 7
747 258.73 atmosphere 995.0 10 > th dose dependent rect. 5 4
759 258.91 wind 9.0 270 < th dose dependent rect. 5 1
766 258.95 wind 9.0 10 < th dose dependent rect. 9 20
767 258.97 humidity 50.0 270 > th dose independent rect. 22 15
770 258.99 temperature 10.0 10 > th dose dependent rect. 23 6
775 259.07 atmosphere 1015.0 270 < th dose independent rect. 9 17
780 259.10 radiation 1.0 270 < th dose independent rect. 4 14
788 259.22 atmosphere 1000.0 10 > th dose independent rect. 10 19
809 259.52 humidity 50.0 10 > th dose dependent rect. 5 5
824 259.72 wind 1.0 30 > th dose independent rect. 5 15
848 260.05 precipitation 0.1 270 < th dose independent rect. 13 9
850 260.05 precipitation 0.1 270 < th dose dependent rect. 13 9
854 260.08 radiation 40.0 90 < th dose independent rect. 4 19
857 260.11 humidity 60.0 10 > th dose independent rect. 5 5
886 260.49 temperature 15.0 10 > th dose independent rect. 10 19
919 260.80 precipitation 0.1 10 < th dose independent rect. 5 4
920 260.80 precipitation 0.1 10 < th dose dependent rect. 5 4
921 260.81 wind 7.0 10 < th dose independent rect. 5 4
923 260.81 temperature 10.0 10 > th dose independent rect. 5 4
925 260.81 temperature 30.0 10 < th dose independent rect. 5 4
928 260.81 atmosphere 995.0 10 > th dose independent rect. 5 4
929 260.81 atmosphere 1015.0 10 < th dose independent rect. 5 4
954 261.05 wind 9.0 90 < th dose dependent rect. 4 7
962 261.15 wind 9.0 270 < th dose dependent rect. 9 17