Os05g0495700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment).
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Os05g0495700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.86 | 0.612 | 7.05 | 0.478 | 0.756 | -0.809 | -1.04 | 1.3 | 0.315 | 23.8 | 79 | 1372 | -- | -- |
| 172.08 | 0.611 | 7.06 | 0.407 | 0.748 | -0.707 | -0.966 | -- | 0.336 | 23.7 | 82 | 1387 | -- | -- |
| 174.32 | 0.615 | 7.05 | 0.519 | 0.732 | -0.815 | -- | 1.24 | 0.325 | 23.5 | 79.97 | 1429 | -- | -- |
| 176.12 | 0.618 | 7.07 | 0.398 | 0.757 | -0.739 | -- | -- | 0.316 | 23.7 | 82 | 1370 | -- | -- |
| 191.21 | 0.648 | 7.05 | 0.33 | -- | -1.02 | -- | 1.83 | 0.299 | -- | 84 | 1582 | -- | -- |
| 184.07 | 0.636 | 7.07 | 0.237 | 0.714 | -- | -1.1 | -- | 0.331 | 23.7 | -- | -- | -- | -- |
| 189.15 | 0.644 | 7.06 | 0.282 | 0.721 | -- | -- | -- | 0.337 | 23.4 | -- | -- | -- | -- |
| 196.7 | 0.656 | 7.06 | 0.323 | -- | -0.968 | -- | -- | 0.304 | -- | 85 | 1583 | -- | -- |
| 179.21 | 0.623 | 7.07 | -- | 0.762 | -0.715 | -- | -- | 0.323 | 23.7 | 94 | 1387 | -- | -- |
| 221.74 | 0.696 | 7.05 | 0.301 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 191.25 | 0.647 | 7.07 | -- | 0.724 | -- | -- | -- | 0.306 | 23.5 | -- | -- | -- | -- |
| 199.2 | 0.66 | 7.05 | -- | -- | -0.946 | -- | -- | 0.316 | -- | 94 | 1387 | -- | -- |
| 224.14 | 0.699 | 7.05 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 6 | 161.17 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 50 | 163.13 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 51 | 163.17 | humidity | 80 | 1440 | > th | dose independent | sin | 4 | NA |
| 124 | 166.11 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 125 | 166.14 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 149 | 166.51 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 150 | 166.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 190 | 167.09 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 204 | 167.24 | humidity | 50 | 1440 | > th | dose dependent | sin | 4 | NA |
| 213 | 167.30 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 272 | 167.96 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 275 | 167.96 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 317 | 168.24 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 390 | 168.59 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 406 | 168.65 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 482 | 169.06 | humidity | 50 | 10 | < th | dose independent | rect. | 17 | 21 |
| 503 | 169.11 | humidity | 50 | 10 | < th | dose dependent | rect. | 17 | 21 |
| 556 | 169.26 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 558 | 169.26 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 560 | 169.26 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 613 | 169.26 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 615 | 169.26 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 617 | 169.26 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 701 | 169.43 | radiation | 10 | 10 | > th | dose independent | rect. | 17 | 14 |
| 704 | 169.45 | humidity | 80 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 714 | 169.46 | humidity | 80 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 741 | 169.58 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 21 |
| 746 | 169.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 748 | 169.60 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 778 | 169.72 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 796 | 169.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 828 | 169.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 854 | 169.93 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 875 | 170.00 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 887 | 170.03 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 939 | 170.15 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 946 | 170.16 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 950 | 170.17 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 980 | 170.21 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 993 | 170.23 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 3 |