Os05g0495100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0495100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.36 | 0.405 | 8.48 | 0.409 | 1.17 | 0.785 | 0.1 | 0.958 | 0.1 | 9.5 | 69 | 1118 | -- | -- |
| 75.9 | 0.406 | 8.47 | 0.498 | 1.16 | 0.843 | 0.315 | -- | 0.0984 | 9.5 | 68.63 | 1121 | -- | -- |
| 74.38 | 0.402 | 8.48 | 0.409 | 1.17 | 0.784 | -- | 0.996 | 0.0995 | 9.48 | 68.93 | 1121 | -- | -- |
| 76.19 | 0.407 | 8.46 | 0.517 | 1.17 | 0.846 | -- | -- | 0.121 | 9.45 | 68.41 | 1121 | -- | -- |
| 107.51 | 0.483 | 8.47 | 0.444 | -- | 1.78 | -- | 1.01 | 0.234 | -- | 74 | 873 | -- | -- |
| 99.11 | 0.467 | 8.46 | 0.326 | 1.39 | -- | 0.533 | -- | 0.122 | 9.92 | -- | -- | -- | -- |
| 100.2 | 0.469 | 8.46 | 0.346 | 1.38 | -- | -- | -- | 0.123 | 9.87 | -- | -- | -- | -- |
| 108.62 | 0.485 | 8.47 | 0.527 | -- | 1.77 | -- | -- | 0.237 | -- | 74.21 | 872 | -- | -- |
| 82.81 | 0.424 | 8.48 | -- | 1.2 | 0.771 | -- | -- | 0.0405 | 9.52 | 68 | 1134 | -- | -- |
| 215.01 | 0.685 | 8.49 | 0.331 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 103.37 | 0.476 | 8.47 | -- | 1.38 | -- | -- | -- | 0.0844 | 9.85 | -- | -- | -- | -- |
| 115.86 | 0.501 | 8.48 | -- | -- | 1.73 | -- | -- | 0.175 | -- | 74.86 | 867 | -- | -- |
| 217.91 | 0.689 | 8.5 | -- | -- | -- | -- | -- | 0.0866 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.38 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 4 | 70.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 5 | 70.38 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 7 | 70.64 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 14 | 71.43 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 13 |
| 15 | 71.44 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 16 | 71.44 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 19 | 71.65 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 20 | 71.65 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 25 | 71.93 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 27 | 71.98 | radiation | 10.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 28 | 72.03 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 5 |
| 29 | 72.03 | wind | 7.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 31 | 72.03 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 35 | 72.07 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 36 | 72.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 39 | 72.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 42 | 72.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 43 | 72.08 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 45 | 72.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 50 | 72.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 51 | 72.08 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 56 | 72.10 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 5 |
| 65 | 72.32 | wind | 5.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 67 | 72.33 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 75 | 72.70 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 76 | 72.73 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 79 | 72.76 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 86 | 72.84 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 89 | 72.86 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 93 | 72.91 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 96 | 72.96 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 103 | 73.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 106 | 73.06 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 109 | 73.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 1 | 5 |
| 110 | 73.06 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 112 | 73.06 | radiation | 20.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 115 | 73.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 19 |
| 126 | 73.17 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 142 | 73.29 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 144 | 73.29 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 145 | 73.29 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 148 | 73.29 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 149 | 73.29 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 151 | 73.29 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 165 | 73.29 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 167 | 73.29 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 186 | 73.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 220 | 73.48 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 263 | 73.72 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 19 |
| 266 | 73.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 274 | 73.82 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 306 | 73.94 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 340 | 74.05 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 361 | 74.18 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 10 |
| 397 | 74.32 | radiation | 20.0 | 30 | < th | dose independent | rect. | 13 | 17 |
| 421 | 74.36 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 428 | 74.39 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 440 | 74.44 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 11 |
| 459 | 74.54 | humidity | 70.0 | 720 | > th | dose independent | rect. | 14 | 18 |
| 470 | 74.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 471 | 74.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 472 | 74.59 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 473 | 74.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 476 | 74.59 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 480 | 74.59 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 485 | 74.59 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 486 | 74.59 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 490 | 74.59 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 510 | 74.69 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 537 | 74.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 10 |
| 539 | 74.79 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 541 | 74.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 562 | 74.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 563 | 74.82 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 564 | 74.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 566 | 74.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 577 | 74.84 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 589 | 74.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 625 | 75.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 636 | 75.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 676 | 75.15 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 742 | 75.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 779 | 75.44 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 12 |
| 827 | 75.56 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 829 | 75.57 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 842 | 75.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 861 | 75.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 19 |
| 862 | 75.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 19 |
| 868 | 75.76 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 872 | 75.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 881 | 75.82 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 882 | 75.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 888 | 75.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 890 | 75.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 919 | 75.96 | radiation | 1.0 | 270 | > th | dose independent | sin | 7 | NA |
| 926 | 75.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 16 | 14 |
| 929 | 75.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 16 | 14 |
| 935 | 76.02 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 949 | 76.06 | radiation | 1.0 | 270 | < th | dose independent | sin | 7 | NA |
| 952 | 76.06 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 962 | 76.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 21 |
| 968 | 76.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 21 |
| 975 | 76.11 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 998 | 76.19 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 4 |