Os05g0491000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os05g0491000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.57 | 0.516 | 9.05 | -1.74 | 2.73 | -1.49 | -0.0749 | 1.72 | -0.138 | 0.0141 | 21.58 | 603 | -- | -- |
| 123.26 | 0.517 | 9.03 | -1.6 | 2.76 | -1.76 | -0.112 | -- | -0.101 | 0.00892 | 21.48 | 514 | -- | -- |
| 120.25 | 0.511 | 9.06 | -1.75 | 2.75 | -1.4 | -- | 1.8 | -0.147 | 0.0282 | 22.26 | 561 | -- | -- |
| 123.04 | 0.517 | 9.02 | -1.6 | 2.77 | -2 | -- | -- | -0.111 | 0.0604 | 21.4 | 477 | -- | -- |
| 537.56 | 1.08 | 9.09 | -2.18 | -- | -2.61 | -- | 1.78 | -0.506 | -- | 27 | 845 | -- | -- |
| 156.78 | 0.587 | 8.98 | -1.18 | 2.83 | -- | -0.384 | -- | 0.0995 | 23.9 | -- | -- | -- | -- |
| 157.42 | 0.588 | 8.98 | -1.16 | 2.84 | -- | -- | -- | 0.101 | 23.9 | -- | -- | -- | -- |
| 540.97 | 1.08 | 9.05 | -1.88 | -- | -2.74 | -- | -- | -0.473 | -- | 26.6 | 852 | -- | -- |
| 181.78 | 0.628 | 8.97 | -- | 2.8 | -0.939 | -- | -- | 0.124 | 24 | 22.39 | 435 | -- | -- |
| 663.92 | 1.2 | 8.92 | -1.08 | -- | -- | -- | -- | 0.139 | -- | -- | -- | -- | -- |
| 193.14 | 0.65 | 8.95 | -- | 2.82 | -- | -- | -- | 0.231 | 23.9 | -- | -- | -- | -- |
| 622.63 | 1.16 | 8.98 | -- | -- | -1.98 | -- | -- | -0.136 | -- | 26.6 | 840 | -- | -- |
| 694.58 | 1.23 | 8.89 | -- | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 3 | 115.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 43 | 117.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 45 | 117.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 52 | 117.59 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 53 | 117.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 57 | 117.61 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 84 | 117.87 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 85 | 117.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 90 | 117.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 4 |
| 97 | 117.97 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 145 | 118.47 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 156 | 118.56 | humidity | 90 | 14400 | > th | dose dependent | sin | 16 | NA |
| 159 | 118.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 6 |
| 171 | 118.73 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 173 | 118.74 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 212 | 119.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 213 | 119.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 10 |
| 222 | 119.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 260 | 119.54 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 263 | 119.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 406 | 120.29 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 410 | 120.33 | humidity | 90 | 14400 | > th | dose independent | sin | 4 | NA |
| 440 | 120.44 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 461 | 120.50 | humidity | 80 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 510 | 120.68 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 516 | 120.70 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 21 |
| 522 | 120.72 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 668 | 121.25 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 671 | 121.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 707 | 121.38 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 21 |
| 749 | 121.47 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 18 |
| 849 | 121.68 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 866 | 121.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 869 | 121.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 18 |
| 874 | 121.72 | humidity | 90 | 14400 | > th | dose independent | sin | 16 | NA |
| 882 | 121.73 | wind | 5 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 913 | 121.79 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 978 | 121.94 | humidity | 90 | 14400 | < th | dose independent | sin | 3 | NA |