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Os05g0479900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.24 (0.0232) R2 : 0.631
β1 : 1.21 (0.0852) R2dD : 0.17 R2D : 0.108
β2 : 1.3 (0.0584) R2dC : 0.4 R2C : 0.397
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.5 (0.0496) R2dN8 : 0.11 R2N8 : 0.049
σ : 0.437
deviance : 87.16
__
_____
C
peak time of C : 3.49
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.47 0.4 7.23 1.18 0.767 0.802 -1.02 -0.148 0.512 5.99 9.295 157 -- --
72.56 0.397 7.23 1.19 0.77 0.785 -1.05 -- 0.513 5.84 9.29 157 -- --
74.9 0.403 7.23 1.17 0.746 0.804 -- -0.214 0.517 5.99 9.3 164 -- --
75.23 0.404 7.23 1.17 0.746 0.804 -- -- 0.517 5.99 9.3 164 -- --
85 0.429 7.24 1.19 -- 1.23 -- -0.76 0.538 -- 5.143 428 -- --
85.45 0.433 7.24 1.2 1.3 -- -0.747 -- 0.496 3.54 -- -- -- --
87.16 0.437 7.24 1.21 1.3 -- -- -- 0.5 3.49 -- -- -- --
86.87 0.434 7.23 1.2 -- 1.2 -- -- 0.557 -- 5.116 405 -- --
111.87 0.493 7.25 -- 0.733 0.856 -- -- 0.394 6.11 9.29 174 -- --
181.57 0.63 7.24 1.27 -- -- -- -- 0.534 -- -- -- -- --
125.78 0.525 7.27 -- 1.32 -- -- -- 0.365 3.49 -- -- -- --
122.48 0.515 7.26 -- -- 1.29 -- -- 0.442 -- 7.607 412 -- --
223.8 0.698 7.27 -- -- -- -- -- 0.394 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.35 radiation 10.0 90 < th dose independent rect. 4 19
3 71.45 radiation 20.0 90 < th dose dependent rect. 4 19
4 71.46 radiation 10.0 270 < th dose dependent rect. 1 20
5 71.47 radiation 10.0 270 < th dose independent rect. 1 20
7 71.62 radiation 30.0 90 < th dose dependent rect. 17 16
10 71.76 humidity 90.0 14400 > th dose dependent rect. 4 1
13 71.88 radiation 10.0 270 < th dose dependent rect. 2 18
14 71.92 atmosphere 995.0 270 > th dose independent rect. 16 14
15 71.93 radiation 10.0 270 < th dose independent rect. 2 18
30 72.47 radiation 10.0 270 < th dose independent rect. 15 16
43 72.68 atmosphere 995.0 270 > th dose independent rect. 11 10
46 72.74 radiation 40.0 270 < th dose independent rect. 11 10
57 72.89 atmosphere 995.0 270 > th dose independent rect. 1 20
83 73.24 atmosphere 1000.0 270 > th dose independent rect. 17 2
96 73.42 atmosphere 995.0 270 > th dose independent rect. 2 18
115 73.57 atmosphere 1000.0 10 > th dose independent rect. 12 11
119 73.58 temperature 15.0 90 > th dose independent rect. 17 16
135 73.67 precipitation 0.1 270 < th dose independent rect. 6 11
136 73.67 precipitation 0.1 270 < th dose dependent rect. 6 11
141 73.71 temperature 15.0 270 > th dose independent rect. 16 14
160 73.82 radiation 10.0 270 < th dose independent rect. 9 22
163 73.83 radiation 10.0 90 < th dose dependent sin 23 NA
168 73.87 temperature 10.0 270 > th dose independent rect. 6 11
169 73.87 atmosphere 1015.0 270 < th dose independent rect. 6 11
182 73.90 atmosphere 1000.0 90 > th dose independent rect. 4 18
198 73.98 temperature 15.0 1440 > th dose independent rect. 3 7
200 73.99 wind 9.0 270 < th dose independent rect. 6 10
206 74.03 atmosphere 1000.0 90 > th dose independent rect. 17 5
213 74.07 wind 9.0 270 < th dose independent rect. 17 13
215 74.08 wind 3.0 43200 < th dose dependent rect. 19 4
222 74.12 wind 1.0 43200 < th dose dependent rect. 23 3
232 74.15 radiation 20.0 90 < th dose dependent rect. 17 22
244 74.20 radiation 10.0 270 < th dose dependent sin 1 NA
251 74.24 atmosphere 995.0 270 > th dose dependent rect. 17 2
252 74.24 radiation 40.0 270 < th dose dependent rect. 11 9
261 74.27 radiation 20.0 90 < th dose dependent rect. 11 23
281 74.37 atmosphere 1010.0 90 < th dose independent rect. 17 16
284 74.37 radiation 20.0 90 < th dose dependent rect. 17 20
296 74.42 humidity 90.0 14400 > th dose dependent rect. 2 13
300 74.44 atmosphere 1000.0 270 > th dose independent rect. 14 7
303 74.45 wind 1.0 43200 < th dose independent rect. 22 4
304 74.45 radiation 10.0 90 < th dose independent rect. 7 15
306 74.45 temperature 10.0 270 > th dose dependent rect. 17 13
319 74.48 temperature 30.0 270 < th dose dependent rect. 22 3
326 74.50 radiation 20.0 14400 > th dose independent rect. 17 14
327 74.51 radiation 20.0 14400 > th dose independent rect. 6 1
361 74.58 atmosphere 995.0 90 > th dose dependent rect. 17 5
362 74.59 humidity 90.0 90 < th dose independent rect. 9 8
364 74.59 radiation 20.0 90 < th dose dependent rect. 15 18
366 74.59 radiation 20.0 90 < th dose dependent rect. 13 21
371 74.60 radiation 40.0 270 < th dose dependent rect. 11 20
383 74.64 temperature 30.0 10 < th dose dependent rect. 22 7
398 74.67 temperature 30.0 90 < th dose dependent rect. 22 6
411 74.71 temperature 15.0 4320 > th dose independent rect. 5 4
430 74.75 radiation 10.0 90 < th dose independent rect. 17 23
435 74.77 radiation 10.0 90 < th dose independent sin 22 NA
444 74.78 radiation 40.0 14400 < th dose dependent rect. 23 6
457 74.81 precipitation 0.1 90 < th dose independent rect. 9 8
458 74.81 precipitation 0.1 90 < th dose dependent rect. 9 8
460 74.82 wind 9.0 90 < th dose independent rect. 9 8
476 74.86 atmosphere 1015.0 270 < th dose independent rect. 1 20
491 74.91 temperature 10.0 90 > th dose independent rect. 9 8
492 74.91 atmosphere 1015.0 90 < th dose independent rect. 9 8
502 74.93 temperature 15.0 270 > th dose independent rect. 11 10
503 74.93 wind 1.0 43200 < th dose dependent rect. 13 13
518 74.96 radiation 20.0 90 < th dose dependent rect. 15 22
520 74.97 precipitation 0.1 270 < th dose independent rect. 21 4
523 74.97 precipitation 0.1 270 < th dose dependent rect. 21 4
537 75.00 atmosphere 1010.0 270 < th dose independent rect. 11 10
548 75.01 wind 1.0 43200 > th dose independent rect. 22 4
550 75.01 wind 9.0 90 < th dose independent rect. 17 16
560 75.02 atmosphere 1015.0 270 < th dose independent rect. 16 14
567 75.04 wind 1.0 43200 > th dose independent rect. 8 1
584 75.08 humidity 50.0 90 > th dose independent rect. 17 16
587 75.08 radiation 10.0 90 < th dose independent rect. 17 20
629 75.15 temperature 10.0 270 > th dose independent rect. 21 4
630 75.15 temperature 30.0 270 < th dose independent rect. 21 4
631 75.15 humidity 50.0 270 > th dose independent rect. 21 4
634 75.15 atmosphere 995.0 270 > th dose independent rect. 21 4
635 75.15 radiation 1.0 270 < th dose independent rect. 21 4
642 75.15 temperature 10.0 270 > th dose independent rect. 1 20
643 75.15 radiation 1.0 270 < th dose dependent rect. 21 4
655 75.16 wind 9.0 270 < th dose independent rect. 21 4
675 75.20 radiation 10.0 90 < th dose independent no NA NA
678 75.20 radiation 20.0 90 < th dose dependent no NA NA
680 75.20 radiation 10.0 270 < th dose dependent rect. 2 12
692 75.23 wind 1.0 43200 > th dose independent rect. 20 6
699 75.24 humidity 60.0 43200 > th dose independent rect. 19 17
707 75.25 wind 1.0 90 > th dose independent rect. 23 18
720 75.27 precipitation 0.1 270 < th dose independent rect. 17 13
724 75.27 precipitation 0.1 270 < th dose dependent rect. 17 13
735 75.29 wind 1.0 270 > th dose independent rect. 11 10
761 75.33 radiation 10.0 90 > th dose independent rect. 9 22
782 75.37 humidity 50.0 270 > th dose independent rect. 17 13
790 75.38 precipitation 0.1 270 < th dose independent rect. 20 6
792 75.38 temperature 15.0 10 > th dose independent rect. 18 15
795 75.38 precipitation 0.1 270 < th dose dependent rect. 20 6
800 75.39 precipitation 0.1 270 < th dose independent rect. 21 14
802 75.39 wind 9.0 270 < th dose independent rect. 1 20
805 75.39 precipitation 0.1 270 < th dose dependent rect. 21 14
826 75.42 humidity 50.0 270 > th dose independent rect. 6 11
834 75.43 humidity 60.0 43200 < th dose independent sin 9 NA
835 75.43 wind 7.0 43200 < th dose independent rect. 5 1
836 75.43 radiation 1.0 90 > th dose independent rect. 9 8
837 75.43 radiation 20.0 10 < th dose independent rect. 18 15
842 75.43 radiation 20.0 14400 > th dose dependent rect. 17 14
848 75.44 humidity 90.0 14400 > th dose dependent sin 5 NA
850 75.45 radiation 1.0 270 > th dose independent rect. 6 10
873 75.48 humidity 60.0 43200 < th dose independent rect. 19 17
876 75.48 temperature 15.0 1440 > th dose independent rect. 3 20
887 75.49 wind 1.0 43200 < th dose dependent sin 16 NA
893 75.50 humidity 60.0 43200 > th dose independent sin 9 NA
896 75.50 radiation 20.0 14400 > th dose dependent rect. 6 1
928 75.52 temperature 10.0 30 > th dose dependent rect. 17 23
929 75.53 wind 1.0 270 > th dose independent rect. 21 5
934 75.54 radiation 10.0 90 < th dose independent rect. 9 13
935 75.54 radiation 40.0 30 < th dose independent rect. 4 19
936 75.54 radiation 10.0 90 > th dose independent rect. 15 23
948 75.55 wind 9.0 270 < th dose independent rect. 21 14
967 75.57 temperature 10.0 1440 > th dose dependent rect. 21 1
969 75.58 wind 3.0 43200 > th dose independent rect. 20 2
990 75.59 temperature 10.0 270 > th dose independent rect. 21 14
992 75.59 atmosphere 995.0 270 > th dose independent rect. 21 14