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Os05g0478900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.03 (0.05) R2 : 0.6
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -3.37 (0.203) R2dE : 0.257 R2E : 0.248
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.88 (0.106) R2dN8 : 0.352 R2N8 : 0.343
σ : 0.938
deviance : 405.94
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.236
memory length : 4277
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.1
open length of G : 11.7

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
388.81 0.926 8.02 -0.682 0.868 -2.85 -0.402 1.29 1.7 0.737 1.01 4316 18 11.9
390.1 0.92 8.02 -0.301 0.897 -2.94 -0.409 -- 1.76 0.644 1.045 4317 18 11.9
389.05 0.919 8.02 -0.597 0.865 -2.85 -- 1.24 1.72 0.78 1.06 4315 18 11.9
390.7 0.921 8.02 -0.292 0.866 -2.97 -- -- 1.76 0.803 1.14 4316 18 11.9
406.34 0.939 8.03 -0.516 -- -2.95 -- 1.2 1.76 -- 1.245 4273 18 12
592.18 1.14 7.96 -0.595 0.99 -- -0.189 -- 2.02 0.932 -- -- -- --
592.31 1.14 7.96 -0.588 0.991 -- -- -- 2.02 0.997 -- -- -- --
406.11 0.939 8.03 -0.247 -- -3.37 -- -- 1.84 -- 1.334 4279 18.1 11.8
390.72 0.921 8.02 -- 0.886 -3.11 -- -- 1.87 0.759 1.239 4316 18.1 11.7
653.41 1.19 7.94 -0.551 -- -- -- -- 2.04 -- -- -- -- --
601.44 1.15 7.94 -- 0.981 -- -- -- 2.08 0.972 -- -- -- --
405.94 0.938 8.03 -- -- -3.37 -- -- 1.88 -- 1.236 4277 18.1 11.7
661.43 1.2 7.93 -- -- -- -- -- 2.1 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 375.97 radiation 30.0 14400 < th dose independent rect. 3 4
2 376.79 radiation 30.0 14400 < th dose independent rect. 1 6
3 377.33 radiation 30.0 14400 < th dose independent rect. 21 10
4 377.40 radiation 30.0 14400 < th dose independent rect. 17 14
9 379.13 radiation 30.0 14400 < th dose independent rect. 23 8
14 381.30 radiation 20.0 14400 > th dose dependent rect. 17 14
16 384.30 atmosphere 1015.0 43200 > th dose independent rect. 14 2
20 384.52 radiation 20.0 14400 > th dose dependent rect. 6 1
33 384.63 temperature 15.0 43200 < th dose independent rect. 5 1
51 385.47 atmosphere 1015.0 43200 < th dose independent rect. 14 5
52 385.62 atmosphere 1015.0 43200 < th dose independent rect. 15 1
53 385.88 atmosphere 1015.0 43200 < th dose independent rect. 15 3
54 385.89 atmosphere 1015.0 43200 < th dose independent rect. 17 1
57 386.10 temperature 15.0 43200 < th dose independent rect. 3 3
76 386.58 radiation 10.0 14400 < th dose dependent rect. 19 10
77 386.94 temperature 15.0 43200 > th dose independent rect. 5 1
80 387.14 radiation 30.0 14400 > th dose independent rect. 16 16
81 387.29 radiation 1.0 14400 < th dose dependent rect. 18 20
86 387.86 radiation 1.0 14400 < th dose dependent rect. 18 18
89 388.04 radiation 1.0 14400 < th dose dependent rect. 18 15
91 388.06 radiation 20.0 14400 > th dose independent rect. 17 14
94 388.36 temperature 15.0 43200 > th dose independent rect. 3 3
102 388.86 humidity 90.0 43200 > th dose dependent rect. 8 1
123 389.66 radiation 1.0 4320 < th dose dependent rect. 18 12
126 389.84 radiation 10.0 14400 < th dose dependent rect. 22 7
127 389.86 radiation 1.0 43200 < th dose independent rect. 18 11
128 389.86 atmosphere 1015.0 43200 > th dose dependent rect. 1 1
129 389.91 radiation 1.0 43200 < th dose dependent rect. 9 1
132 389.97 radiation 1.0 14400 > th dose dependent rect. 18 11
144 390.47 temperature 15.0 43200 > th dose independent rect. 3 8
147 390.50 temperature 15.0 43200 < th dose independent rect. 3 8
156 390.73 radiation 1.0 14400 < th dose dependent rect. 9 3
161 390.87 radiation 20.0 14400 > th dose independent rect. 6 1
176 390.90 radiation 1.0 14400 < th dose dependent sin 9 NA
180 391.02 humidity 90.0 14400 > th dose independent rect. 23 4
183 391.05 radiation 1.0 43200 < th dose independent rect. 9 1
186 391.14 radiation 1.0 43200 > th dose independent rect. 9 1
189 391.16 atmosphere 1015.0 43200 < th dose independent rect. 10 8
191 391.21 atmosphere 1015.0 43200 < th dose independent rect. 10 6
201 391.34 radiation 1.0 14400 < th dose dependent rect. 22 16
209 391.43 atmosphere 1015.0 43200 < th dose independent rect. 11 3
210 391.47 atmosphere 1015.0 43200 > th dose independent rect. 11 2
212 391.51 radiation 1.0 14400 < th dose dependent rect. 4 10
218 391.55 temperature 15.0 43200 > th dose independent rect. 3 11
274 392.43 radiation 1.0 14400 < th dose dependent rect. 20 13
276 392.45 radiation 1.0 14400 < th dose dependent rect. 22 11
293 392.55 radiation 1.0 43200 < th dose independent rect. 18 9
296 392.56 radiation 1.0 43200 < th dose independent rect. 18 7
300 392.57 radiation 1.0 43200 < th dose independent rect. 18 3
308 392.60 humidity 90.0 43200 < th dose independent rect. 9 1
310 392.61 radiation 1.0 43200 < th dose independent rect. 18 1
314 392.62 radiation 1.0 14400 < th dose dependent rect. 8 5
317 392.64 radiation 1.0 14400 < th dose dependent rect. 4 5
318 392.64 radiation 1.0 4320 < th dose dependent rect. 24 6
324 392.69 radiation 1.0 4320 < th dose dependent rect. 4 2
337 392.75 radiation 1.0 4320 < th dose dependent rect. 2 4
361 392.89 radiation 1.0 14400 < th dose dependent rect. 7 7
369 392.95 wind 5.0 43200 < th dose independent rect. 12 2
374 393.01 wind 9.0 43200 < th dose independent rect. 18 2
383 393.06 radiation 10.0 14400 < th dose independent rect. 17 13
428 393.41 wind 5.0 43200 > th dose independent rect. 12 2
436 393.49 radiation 1.0 14400 < th dose dependent rect. 18 3
495 393.97 wind 9.0 43200 > th dose independent rect. 18 2
496 393.98 humidity 90.0 14400 > th dose dependent rect. 1 1
519 394.22 humidity 90.0 43200 > th dose independent rect. 8 2
529 394.38 temperature 15.0 43200 > th dose independent rect. 9 2
541 394.49 humidity 90.0 43200 < th dose independent rect. 5 7
548 394.53 temperature 15.0 43200 > th dose independent sin 4 NA
551 394.54 radiation 1.0 43200 > th dose dependent rect. 18 1
578 394.74 temperature 15.0 43200 < th dose independent rect. 9 2
607 394.96 humidity 90.0 14400 > th dose independent rect. 22 6
608 394.97 temperature 15.0 43200 < th dose independent sin 5 NA
615 395.03 wind 5.0 43200 > th dose independent rect. 10 6
625 395.15 precipitation 0.1 43200 < th dose independent rect. 23 1
627 395.15 precipitation 0.1 43200 < th dose dependent rect. 23 1
650 395.27 radiation 1.0 14400 < th dose dependent rect. 6 23
694 395.53 wind 9.0 43200 > th dose dependent rect. 18 2
696 395.55 radiation 1.0 43200 > th dose independent rect. 18 11
698 395.56 radiation 1.0 14400 < th dose dependent rect. 13 23
703 395.62 wind 7.0 43200 < th dose dependent rect. 11 3
726 395.72 precipitation 0.1 43200 > th dose independent rect. 23 1
727 395.72 precipitation 0.1 43200 > th dose dependent rect. 23 1
744 395.81 radiation 1.0 14400 < th dose dependent rect. 23 22
745 395.81 radiation 1.0 14400 < th dose dependent rect. 4 23
747 395.82 radiation 1.0 14400 < th dose dependent no NA NA
750 395.82 radiation 1.0 14400 < th dose dependent rect. 20 23
784 395.90 radiation 1.0 14400 < th dose dependent rect. 4 17
798 395.92 radiation 1.0 14400 < th dose dependent rect. 4 15
850 396.24 radiation 40.0 14400 < th dose independent rect. 15 12
866 396.34 radiation 40.0 14400 < th dose independent rect. 15 10
869 396.35 humidity 90.0 14400 > th dose independent rect. 22 8
887 396.44 wind 1.0 43200 > th dose dependent rect. 11 3
891 396.47 radiation 1.0 14400 < th dose dependent rect. 6 15
893 396.48 radiation 1.0 14400 > th dose independent rect. 7 7
894 396.48 radiation 1.0 14400 < th dose independent rect. 7 7
910 396.59 radiation 40.0 14400 < th dose independent rect. 15 8
971 396.86 radiation 40.0 14400 < th dose independent rect. 15 6