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Os05g0477800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.06 (0.0347) R2 : 0.741
β1 : -2.47 (0.135) R2dD : 0.225 R2D : 0.338
β2 : 1.19 (0.0851) R2dC : 0.112 R2C : 0.0817
β3 : 1.18 (0.155) R2dE : 0.0337 R2E : 0.038
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 5.85 (0.682) R2dD*E : 0.0479 R2D*E : 0.0824
γ1 : 1.18 (0.0751) R2dN8 : 0.195 R2N8 : 0.234
σ : 0.646
deviance : 192.4
__
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C
peak time of C : 21.4
E
wheather : radiation
threshold : 44.84
memory length : 1867
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
190.05 0.648 6.06 -2.44 1.19 1.16 0.81 5.8 1.18 21.5 44.51 1866 -- --
221.62 0.693 6.06 -2.78 1.11 1.12 0.882 -- 1.19 21.5 43.28 1883 -- --
192.4 0.646 6.06 -2.47 1.19 1.18 -- 5.85 1.18 21.4 44.84 1867 -- --
221.83 0.694 6.06 -2.87 1.31 1.09 -- -- 1.15 21.4 40.3 1863 -- --
258.18 0.748 6.04 -2.41 -- 1.56 -- 5.73 1.12 -- 43.21 2244 -- --
244.22 0.733 6.05 -2.84 1.28 -- 0.897 -- 1.2 21.1 -- -- -- --
247.04 0.736 6.05 -2.87 1.28 -- -- -- 1.2 21.1 -- -- -- --
286.34 0.788 6.09 -2.99 -- 1.33 -- -- 0.932 -- 34.03 2230 -- --
349.38 0.871 5.88 -- 1.3 1.77 -- -- 1.96 21.1 58.39 47520 -- --
341.66 0.864 6.02 -2.87 -- -- -- -- 1.19 -- -- -- -- --
464.87 1.01 5.98 -- 1.29 -- -- -- 1.52 20.9 -- -- -- --
446.52 0.984 5.85 -- -- 1.75 -- -- 1.95 -- 58.39 47520 -- --
559.28 1.1 5.95 -- -- -- -- -- 1.51 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 190.51 radiation 1 1440 < th dose dependent rect. 18 10
7 190.84 radiation 1 1440 < th dose dependent rect. 18 6
15 191.59 radiation 40 1440 > th dose dependent sin 13 NA
25 193.57 radiation 40 1440 > th dose dependent rect. 12 21
27 193.65 radiation 40 1440 < th dose independent rect. 13 20
29 193.76 radiation 10 1440 < th dose independent sin 13 NA
32 194.04 wind 3 43200 < th dose independent rect. 3 1
33 194.06 radiation 10 1440 < th dose independent rect. 15 15
43 194.29 wind 3 43200 > th dose independent rect. 3 1
45 194.31 radiation 40 1440 > th dose dependent rect. 12 4
63 194.33 radiation 30 14400 > th dose independent rect. 16 16
64 194.35 radiation 10 1440 < th dose independent rect. 15 8
67 194.36 temperature 25 14400 > th dose dependent rect. 4 2
75 194.44 radiation 20 14400 > th dose dependent rect. 16 15
76 194.45 radiation 10 1440 < th dose independent rect. 15 3
84 194.67 radiation 40 1440 > th dose independent rect. 13 20
95 194.80 radiation 1 1440 > th dose dependent rect. 17 13
98 194.88 radiation 20 14400 > th dose dependent rect. 16 1
143 195.11 radiation 40 1440 < th dose independent sin 13 NA
173 195.32 radiation 20 1440 < th dose dependent rect. 15 16
184 195.44 radiation 1 1440 > th dose dependent rect. 17 2
200 195.60 radiation 10 1440 < th dose dependent sin 13 NA
225 195.83 radiation 40 1440 < th dose independent rect. 13 16
228 195.85 radiation 40 1440 < th dose independent rect. 13 11
235 195.88 radiation 20 14400 < th dose independent rect. 16 12
237 195.89 radiation 40 1440 < th dose independent rect. 13 4
241 195.91 radiation 20 14400 < th dose independent rect. 16 7
247 195.92 radiation 20 14400 < th dose independent rect. 16 2
270 196.02 radiation 30 14400 > th dose dependent rect. 15 17
288 196.23 radiation 40 1440 > th dose independent sin 13 NA
296 196.31 radiation 30 14400 > th dose independent rect. 7 1
331 196.38 radiation 40 1440 > th dose independent rect. 13 3
388 196.60 temperature 25 14400 > th dose independent rect. 4 1
394 196.66 radiation 10 1440 > th dose independent rect. 15 15
399 196.74 radiation 10 1440 > th dose independent rect. 15 3
417 196.80 wind 3 43200 > th dose dependent sin 5 NA
422 196.85 wind 3 43200 > th dose dependent rect. 2 12
431 196.92 wind 3 43200 > th dose dependent rect. 24 14
437 197.01 wind 7 43200 > th dose independent rect. 10 1
453 197.06 wind 1 43200 > th dose dependent rect. 3 1
454 197.12 radiation 1 1440 > th dose dependent sin 13 NA
455 197.18 wind 5 43200 < th dose dependent rect. 3 1
460 197.34 radiation 1 1440 < th dose independent rect. 18 11
483 197.60 wind 7 43200 > th dose independent rect. 6 5
493 197.71 wind 7 43200 < th dose independent rect. 6 5
500 197.79 radiation 1 1440 > th dose dependent rect. 13 19
502 197.84 radiation 1 14400 > th dose dependent rect. 17 2
513 197.85 radiation 30 14400 < th dose independent rect. 15 17
520 197.88 wind 5 43200 < th dose independent rect. 24 16
529 197.95 radiation 40 1440 < th dose dependent sin 13 NA
532 197.96 wind 9 43200 < th dose dependent rect. 2 11
535 197.98 radiation 1 1440 < th dose independent rect. 18 6
553 198.02 wind 7 43200 < th dose independent rect. 10 1
561 198.05 wind 9 43200 < th dose dependent rect. 24 13
573 198.08 wind 5 43200 < th dose independent rect. 6 1
589 198.12 radiation 40 14400 < th dose dependent rect. 17 12
591 198.13 radiation 20 14400 > th dose independent rect. 16 1
617 198.15 radiation 40 14400 < th dose dependent rect. 18 10
627 198.17 wind 5 43200 < th dose independent sin 4 NA
631 198.18 radiation 10 1440 > th dose independent sin 13 NA
639 198.20 wind 5 43200 > th dose independent rect. 24 16
640 198.20 radiation 1 14400 < th dose dependent rect. 18 5
643 198.21 wind 9 43200 < th dose dependent rect. 24 4
644 198.21 radiation 20 14400 < th dose dependent rect. 17 6
662 198.24 wind 1 43200 > th dose dependent rect. 8 4
672 198.26 radiation 1 1440 > th dose independent rect. 18 11
674 198.27 radiation 1 14400 < th dose dependent rect. 18 2
703 198.32 radiation 1 14400 < th dose dependent rect. 18 10
721 198.38 radiation 1 1440 > th dose independent rect. 18 1
773 198.45 wind 5 43200 < th dose independent rect. 2 13
811 198.56 wind 9 43200 < th dose dependent rect. 8 4
820 198.61 wind 5 43200 > th dose independent sin 4 NA
831 198.66 wind 5 43200 > th dose independent rect. 6 1
848 198.74 radiation 40 1440 > th dose dependent no NA NA
850 198.74 radiation 40 1440 > th dose dependent rect. 8 8