Os05g0463900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HECT domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0463900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : HECT domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.5 | 0.246 | 11.8 | 0.716 | 0.597 | -0.577 | -0.0817 | 0.336 | 0.268 | 0.531 | 1052 | 11443 | -- | -- |
| 27.6 | 0.245 | 11.9 | 0.656 | 0.602 | -0.54 | -0.0863 | -- | 0.255 | 0.534 | 1057 | 10892 | -- | -- |
| 27.53 | 0.244 | 11.8 | 0.718 | 0.598 | -0.577 | -- | 0.335 | 0.269 | 0.537 | 1203 | 11440 | -- | -- |
| 27.63 | 0.245 | 11.9 | 0.659 | 0.603 | -0.541 | -- | -- | 0.256 | 0.542 | 1071 | 10892 | -- | -- |
| 49.79 | 0.329 | 11.8 | 0.775 | -- | -0.608 | -- | 0.516 | 0.286 | -- | 1202 | 11745 | -- | -- |
| 33.46 | 0.271 | 11.9 | 0.533 | 0.6 | -- | -0.114 | -- | 0.253 | 0.5 | -- | -- | -- | -- |
| 33.51 | 0.271 | 11.9 | 0.537 | 0.601 | -- | -- | -- | 0.254 | 0.511 | -- | -- | -- | -- |
| 50.08 | 0.33 | 11.8 | 0.681 | -- | -0.558 | -- | -- | 0.268 | -- | 2778 | 11650 | -- | -- |
| 38.37 | 0.288 | 11.9 | -- | 0.609 | -0.362 | -- | -- | 0.187 | 0.582 | 1085 | 11393 | -- | -- |
| 56.16 | 0.35 | 11.8 | 0.558 | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
| 41.12 | 0.3 | 11.9 | -- | 0.609 | -- | -- | -- | 0.194 | 0.555 | -- | -- | -- | -- |
| 61.57 | 0.365 | 11.9 | -- | -- | -0.367 | -- | -- | 0.196 | -- | 2660 | 11648 | -- | -- |
| 64.37 | 0.374 | 11.9 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 2 | 26.50 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 8 | 26.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 9 | 26.86 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 10 | 26.88 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 11 | 26.89 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 12 | 26.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 13 | 27.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 14 | 27.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 16 | 27.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 18 | 27.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 21 | 27.19 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 26 | 27.25 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 31 | 27.32 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 34 | 27.33 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 50 | 27.40 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 54 | 27.41 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 2 | 16 |
| 69 | 27.44 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 86 | 27.47 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 89 | 27.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 91 | 27.48 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 143 | 27.57 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 158 | 27.58 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 160 | 27.59 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 169 | 27.60 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 223 | 27.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 224 | 27.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 229 | 27.66 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 252 | 27.67 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 255 | 27.68 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 274 | 27.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 298 | 27.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 299 | 27.72 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 312 | 27.72 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 315 | 27.73 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 316 | 27.73 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 352 | 27.75 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 385 | 27.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 387 | 27.78 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 440 | 27.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 459 | 27.82 | wind | 9.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 460 | 27.82 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 588 | 27.91 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 626 | 27.93 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 685 | 27.97 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 700 | 27.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 716 | 27.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 734 | 28.00 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 751 | 28.01 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 766 | 28.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 776 | 28.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 777 | 28.03 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 811 | 28.05 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 828 | 28.06 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 843 | 28.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 878 | 28.09 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 912 | 28.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 920 | 28.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 14 |