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Os05g0453300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.036) R2 : 0.663
β1 : 1.29 (0.132) R2dD : 0.073 R2D : 0.0685
β2 : 2.61 (0.0931) R2dC : 0.582 R2C : 0.591
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.201 (0.0768) R2dN8 : 0.00679 R2N8 : -0.000494
σ : 0.676
deviance : 208.6
__
_____
C
peak time of C : 4.88
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
183.3 0.636 13.4 1.59 2.55 -0.531 -1.51 1.01 0.32 4.98 19.4 88 -- --
186.47 0.636 13.4 1.48 2.52 -0.696 -1.79 -- 0.294 4.95 19.3 133 -- --
188.67 0.64 13.4 1.63 2.55 -0.499 -- 1.33 0.335 5 19.4 89 -- --
194.49 0.65 13.4 1.52 2.53 -0.779 -- -- 0.3 5.01 19.19 134 -- --
419.43 0.954 13.3 2.22 -- -1.49 -- 1.49 0.85 -- 25.88 318 -- --
199.12 0.662 13.5 1.28 2.62 -- -1.92 -- 0.191 4.82 -- -- -- --
208.6 0.676 13.4 1.29 2.61 -- -- -- 0.201 4.88 -- -- -- --
416.74 0.951 13.4 1.77 -- -1.45 -- -- 0.732 -- 25.9 315 -- --
242.04 0.725 13.5 -- 2.84 0.423 -- -- 0.0337 4.66 27.7 2 -- --
567.76 1.11 13.5 1.38 -- -- -- -- 0.268 -- -- -- -- --
252.13 0.743 13.5 -- 2.63 -- -- -- 0.0579 4.86 -- -- -- --
496.25 1.04 13.4 -- -- -1.29 -- -- 0.484 -- 25.9 315 -- --
618.13 1.16 13.5 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 166.27 radiation 30.0 14400 < th dose independent rect. 17 8
2 166.41 radiation 1.0 1440 > th dose independent rect. 9 3
3 167.19 temperature 30.0 270 < th dose independent rect. 13 1
4 167.31 temperature 30.0 270 < th dose independent rect. 11 5
8 168.82 radiation 1.0 1440 < th dose independent rect. 9 2
9 168.82 radiation 1.0 1440 < th dose dependent rect. 9 2
12 169.22 atmosphere 1000.0 270 > th dose independent rect. 14 23
13 169.24 humidity 90.0 270 < th dose independent rect. 11 5
16 169.41 humidity 90.0 14400 < th dose dependent rect. 1 7
17 169.48 humidity 90.0 270 < th dose independent rect. 10 7
19 169.58 radiation 1.0 1440 > th dose independent rect. 11 1
21 169.60 atmosphere 1000.0 270 > th dose independent rect. 16 19
28 170.27 humidity 90.0 270 < th dose independent rect. 13 1
29 170.42 humidity 90.0 14400 < th dose dependent rect. 4 3
32 170.62 atmosphere 1000.0 30 > th dose independent rect. 18 19
34 170.73 wind 1.0 10 > th dose independent rect. 18 19
41 170.99 humidity 50.0 10 > th dose independent rect. 18 19
42 171.01 temperature 15.0 270 > th dose independent rect. 11 5
43 171.01 temperature 20.0 90 > th dose independent rect. 13 15
45 171.07 humidity 50.0 270 > th dose independent rect. 11 5
46 171.09 atmosphere 1015.0 270 < th dose dependent rect. 10 6
47 171.10 temperature 20.0 10 > th dose independent rect. 13 15
53 171.23 atmosphere 1000.0 270 > th dose independent rect. 7 15
56 171.37 atmosphere 1000.0 270 > th dose independent rect. 16 7
58 171.40 wind 1.0 270 > th dose independent rect. 11 5
60 171.41 temperature 15.0 270 > th dose independent rect. 10 7
62 171.43 wind 9.0 270 < th dose independent rect. 11 5
63 171.43 humidity 80.0 14400 < th dose independent rect. 19 13
65 171.44 humidity 80.0 14400 > th dose independent rect. 21 12
66 171.44 temperature 30.0 270 < th dose dependent rect. 12 2
68 171.48 humidity 80.0 14400 < th dose dependent rect. 20 7
72 171.54 temperature 30.0 10 < th dose independent rect. 12 6
75 171.60 humidity 80.0 14400 > th dose independent rect. 19 12
81 171.70 humidity 50.0 270 > th dose independent rect. 10 7
82 171.70 humidity 80.0 14400 < th dose dependent rect. 21 4
83 171.74 radiation 1.0 1440 > th dose independent rect. 4 1
93 171.74 radiation 1.0 1440 > th dose dependent rect. 4 1
94 171.74 humidity 80.0 14400 < th dose dependent rect. 21 2
109 171.79 precipitation 0.1 270 < th dose independent rect. 16 19
112 171.79 precipitation 0.1 270 < th dose dependent rect. 16 19
114 171.81 wind 9.0 270 < th dose independent rect. 16 19
118 171.89 precipitation 0.1 270 < th dose independent rect. 11 5
119 171.89 precipitation 0.1 270 < th dose dependent rect. 11 5
120 171.90 wind 1.0 270 > th dose independent rect. 16 19
126 171.97 atmosphere 1015.0 270 < th dose independent rect. 11 5
127 171.97 temperature 10.0 270 > th dose independent rect. 16 19
132 172.09 wind 1.0 30 > th dose independent rect. 13 5
147 172.22 humidity 80.0 14400 < th dose independent rect. 20 7
150 172.24 wind 1.0 270 > th dose dependent rect. 13 1
159 172.30 temperature 15.0 270 > th dose independent rect. 23 17
161 172.36 humidity 90.0 30 < th dose independent rect. 13 5
162 172.36 temperature 20.0 270 > th dose independent rect. 11 16
164 172.38 humidity 50.0 270 > th dose independent rect. 23 17
169 172.48 atmosphere 995.0 270 > th dose independent rect. 11 5
181 172.60 wind 1.0 270 > th dose independent rect. 13 1
186 172.65 wind 9.0 14400 > th dose dependent rect. 14 1
188 172.67 precipitation 0.1 270 < th dose independent rect. 14 23
189 172.67 precipitation 0.1 270 < th dose dependent rect. 14 23
190 172.68 temperature 30.0 90 < th dose dependent rect. 12 5
193 172.73 atmosphere 1015.0 270 < th dose dependent rect. 13 1
195 172.75 temperature 30.0 10 < th dose independent rect. 24 18
196 172.76 humidity 50.0 270 > th dose independent rect. 13 1
202 172.81 wind 9.0 270 < th dose independent rect. 13 1
203 172.81 precipitation 0.1 10 < th dose independent rect. 18 19
204 172.81 precipitation 0.1 10 < th dose dependent rect. 18 19
207 172.85 humidity 80.0 14400 > th dose independent sin 10 NA
217 172.93 precipitation 0.1 270 < th dose independent rect. 13 1
219 172.93 precipitation 0.1 270 < th dose dependent rect. 13 1
220 172.95 temperature 10.0 270 > th dose independent rect. 13 1
222 172.95 atmosphere 995.0 270 > th dose independent rect. 13 1
223 172.95 atmosphere 1010.0 270 < th dose independent rect. 13 1
226 172.95 temperature 10.0 270 > th dose independent rect. 14 23
236 173.03 humidity 80.0 14400 < th dose independent sin 10 NA
237 173.03 humidity 50.0 10 > th dose independent rect. 13 5
247 173.11 humidity 80.0 14400 > th dose independent rect. 21 6
272 173.28 wind 1.0 270 > th dose independent rect. 10 7
274 173.28 atmosphere 1015.0 10 < th dose dependent rect. 13 5
278 173.32 temperature 10.0 30 > th dose independent rect. 13 5
280 173.32 atmosphere 1010.0 30 < th dose independent rect. 13 5
283 173.32 temperature 10.0 30 > th dose independent rect. 18 19
284 173.32 atmosphere 995.0 30 > th dose dependent rect. 18 19
289 173.33 wind 9.0 270 < th dose independent rect. 23 17
293 173.35 atmosphere 1015.0 270 < th dose independent rect. 23 17
294 173.36 wind 1.0 30 > th dose independent rect. 16 21
296 173.38 precipitation 0.1 10 < th dose independent rect. 13 5
298 173.38 precipitation 0.1 10 < th dose dependent rect. 13 5
309 173.44 temperature 20.0 10 > th dose independent rect. 13 18
341 173.73 wind 9.0 270 < th dose independent rect. 10 7
344 173.80 wind 9.0 270 < th dose independent rect. 16 7
349 173.89 atmosphere 1000.0 270 > th dose independent rect. 10 7
356 173.93 wind 9.0 30 < th dose independent rect. 13 5
364 173.99 precipitation 0.1 270 < th dose independent rect. 17 17
367 173.99 precipitation 0.1 270 < th dose dependent rect. 17 17
370 174.01 precipitation 0.1 270 < th dose independent rect. 10 7
372 174.01 precipitation 0.1 270 < th dose dependent rect. 10 7
373 174.02 atmosphere 995.0 10 > th dose independent rect. 13 5
387 174.10 temperature 10.0 270 > th dose independent rect. 16 7
388 174.10 radiation 40.0 270 < th dose independent rect. 16 7
401 174.15 atmosphere 1015.0 270 < th dose independent rect. 10 7
403 174.15 temperature 10.0 270 > th dose independent rect. 17 17
413 174.22 wind 1.0 270 > th dose independent rect. 16 7
420 174.25 precipitation 0.1 270 < th dose independent rect. 16 7
422 174.25 precipitation 0.1 270 < th dose dependent rect. 16 7
423 174.26 precipitation 0.1 270 < th dose independent rect. 23 17
424 174.26 precipitation 0.1 270 < th dose dependent rect. 23 17
439 174.38 wind 9.0 30 < th dose independent rect. 18 19
464 174.54 wind 1.0 30 > th dose dependent rect. 13 5
480 174.65 humidity 50.0 270 > th dose independent rect. 16 19
481 174.66 radiation 10.0 1440 < th dose independent rect. 19 10
494 174.74 atmosphere 1000.0 10 > th dose independent rect. 9 15
498 174.76 temperature 10.0 1440 > th dose independent rect. 14 5
503 174.76 temperature 10.0 1440 > th dose independent rect. 19 19
506 174.76 atmosphere 995.0 1440 > th dose independent rect. 19 19
508 174.77 atmosphere 995.0 270 > th dose dependent rect. 16 6
510 174.79 wind 1.0 30 > th dose independent rect. 18 6
511 174.79 atmosphere 1000.0 10 > th dose independent rect. 18 6
530 174.94 humidity 50.0 270 > th dose independent rect. 17 17
541 174.99 atmosphere 995.0 270 > th dose independent rect. 23 17
553 175.05 wind 9.0 14400 > th dose independent rect. 13 2
568 175.14 atmosphere 995.0 30 > th dose dependent rect. 16 21
592 175.31 radiation 1.0 1440 > th dose independent rect. 13 1
598 175.33 temperature 30.0 10 < th dose dependent rect. 13 3
608 175.36 humidity 60.0 14400 < th dose independent rect. 6 1
610 175.36 humidity 60.0 14400 < th dose independent rect. 20 1
612 175.36 radiation 20.0 14400 > th dose independent rect. 17 1
665 175.36 humidity 60.0 14400 < th dose dependent rect. 6 1
667 175.36 humidity 60.0 14400 < th dose dependent rect. 20 1
669 175.36 radiation 20.0 14400 > th dose dependent rect. 17 1
750 175.56 humidity 50.0 14400 > th dose dependent rect. 3 5
756 175.58 radiation 1.0 10 < th dose dependent rect. 7 9
768 175.63 radiation 20.0 1440 < th dose dependent rect. 19 10
776 175.69 temperature 20.0 10 > th dose independent rect. 13 20
783 175.71 radiation 1.0 10 < th dose independent rect. 7 9
799 175.79 radiation 1.0 10 < th dose dependent rect. 11 5
804 175.80 humidity 80.0 14400 < th dose independent rect. 5 1
816 175.84 atmosphere 995.0 10 > th dose dependent rect. 18 6
819 175.85 atmosphere 1015.0 10 < th dose dependent rect. 24 18
829 175.92 radiation 1.0 10 < th dose independent rect. 11 5
834 175.93 wind 9.0 14400 < th dose independent rect. 13 2
870 176.08 wind 1.0 30 > th dose independent rect. 13 3
888 176.15 radiation 30.0 270 < th dose independent rect. 16 19
911 176.22 atmosphere 1015.0 10 < th dose dependent rect. 13 16
924 176.27 temperature 20.0 10 > th dose independent rect. 24 18
944 176.31 temperature 30.0 270 < th dose independent rect. 16 19
963 176.38 humidity 60.0 14400 > th dose independent rect. 6 2
972 176.42 atmosphere 1015.0 10 < th dose independent rect. 24 18
983 176.46 wind 1.0 30 > th dose independent rect. 18 8