Os05g0452800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os05g0452800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.32 | 0.611 | 7.38 | 0.0664 | 1.31 | -2 | -0.983 | -3.07 | 0.0134 | 14.1 | 1.05 | 1491 | -- | -- |
| 170.67 | 0.608 | 7.43 | -0.128 | 1.14 | -1.58 | -1.03 | -- | -0.0594 | 14.1 | 2.09 | 1575 | -- | -- |
| 172.58 | 0.612 | 7.38 | 0.000579 | 1.37 | -1.94 | -- | -2.69 | 0.0186 | 14.1 | 1.04 | 1480 | -- | -- |
| 169.23 | 0.606 | 7.44 | -0.242 | 0.95 | -1.87 | -- | -- | -0.139 | 14.2 | 2.141 | 1599 | -- | -- |
| 178.91 | 0.623 | 7.41 | -0.203 | -- | -3.08 | -- | -0.826 | -0.0654 | -- | 1.671 | 1716 | -- | -- |
| 209.08 | 0.678 | 7.37 | 0.00313 | 1.53 | -- | -0.73 | -- | 0.145 | 13.8 | -- | -- | -- | -- |
| 211.17 | 0.681 | 7.37 | -0.0199 | 1.53 | -- | -- | -- | 0.141 | 13.8 | -- | -- | -- | -- |
| 176.65 | 0.619 | 7.45 | -0.223 | -- | -2.87 | -- | -- | -0.127 | -- | 1.709 | 1719 | -- | -- |
| 170.58 | 0.608 | 7.44 | -- | 0.95 | -1.87 | -- | -- | -0.105 | 14.2 | 2.12 | 1600 | -- | -- |
| 353.12 | 0.878 | 7.39 | -0.0824 | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
| 211.18 | 0.68 | 7.37 | -- | 1.53 | -- | -- | -- | 0.143 | 13.8 | -- | -- | -- | -- |
| 179.18 | 0.623 | 7.44 | -- | -- | -2.88 | -- | -- | -0.131 | -- | 1.709 | 1721 | -- | -- |
| 353.3 | 0.877 | 7.39 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.57 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 3 | 159.77 | temperature | 25 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 4 | 159.78 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 6 | 159.82 | temperature | 30 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 16 | 159.94 | temperature | 30 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 27 | 160.06 | temperature | 30 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 30 | 160.07 | temperature | 30 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 37 | 160.07 | temperature | 30 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 47 | 160.10 | temperature | 30 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 49 | 160.10 | temperature | 30 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 108 | 160.18 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 110 | 160.19 | temperature | 30 | 43200 | < th | dose independent | sin | 15 | NA |
| 158 | 160.23 | temperature | 30 | 43200 | > th | dose independent | sin | 15 | NA |
| 170 | 160.25 | temperature | 30 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 172 | 160.25 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 218 | 160.27 | temperature | 25 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 332 | 160.38 | temperature | 30 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 408 | 160.40 | temperature | 25 | 43200 | > th | dose dependent | sin | 15 | NA |
| 414 | 160.41 | temperature | 30 | 43200 | < th | dose independent | no | NA | NA |
| 512 | 160.44 | temperature | 30 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 594 | 160.47 | temperature | 30 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 603 | 160.48 | temperature | 30 | 43200 | > th | dose independent | no | NA | NA |
| 698 | 160.48 | temperature | 25 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 839 | 160.55 | temperature | 30 | 43200 | > th | dose independent | rect. | 16 | 23 |
| 870 | 160.56 | temperature | 25 | 43200 | > th | dose dependent | no | NA | NA |
| 942 | 160.61 | temperature | 20 | 43200 | > th | dose dependent | rect. | 5 | 1 |