Os05g0445000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0445000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.34 | 0.699 | 4.7 | 0.0544 | 1.86 | -1.98 | 0.361 | -4.04 | 0.29 | 13.1 | 1.501 | 15951 | -- | -- |
| 234.93 | 0.714 | 4.55 | 0.958 | 1.62 | -1.82 | 0.276 | -- | 0.633 | 13.3 | 10.01 | 14209 | -- | -- |
| 219.74 | 0.69 | 4.69 | 0.0115 | 1.91 | -1.92 | -- | -3.87 | 0.313 | 13.2 | 1.87 | 16013 | -- | -- |
| 227.13 | 0.702 | 4.56 | 0.888 | 2.07 | -1.87 | -- | -- | 0.586 | 13.2 | 2.5 | 16123 | -- | -- |
| 378.06 | 0.911 | 4.74 | 0.36 | -- | 1.24 | -- | 0.485 | -0.0646 | -- | 10.89 | 14148 | -- | -- |
| 322.21 | 0.842 | 4.72 | 0.525 | 1.84 | -- | 0.225 | -- | -0.0567 | 13.2 | -- | -- | -- | -- |
| 322.41 | 0.841 | 4.72 | 0.533 | 1.84 | -- | -- | -- | -0.0553 | 13.2 | -- | -- | -- | -- |
| 379.48 | 0.911 | 4.74 | 0.38 | -- | 1.24 | -- | -- | -0.0642 | -- | 10.89 | 14148 | -- | -- |
| 248.22 | 0.734 | 4.62 | -- | 2.1 | -1.63 | -- | -- | 0.496 | 13.4 | 2.73 | 16220 | -- | -- |
| 532.36 | 1.08 | 4.75 | 0.462 | -- | -- | -- | -- | -0.0926 | -- | -- | -- | -- | -- |
| 329.89 | 0.85 | 4.73 | -- | 1.83 | -- | -- | -- | -0.115 | 13.2 | -- | -- | -- | -- |
| 383.29 | 0.915 | 4.75 | -- | -- | 1.25 | -- | -- | -0.106 | -- | 10.89 | 14148 | -- | -- |
| 537.98 | 1.08 | 4.76 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.29 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 4 | 215.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 5 | 215.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 6 | 215.91 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 7 | 215.91 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 19 |
| 12 | 216.00 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 14 | 216.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 15 | 216.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 19 |
| 25 | 216.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 27 | 216.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 29 | 216.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 21 |
| 30 | 216.21 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 42 | 216.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 66 | 216.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 69 | 216.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 10 |
| 72 | 216.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 73 | 216.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 10 |
| 75 | 216.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 18 |
| 83 | 216.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 96 | 216.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 10 |
| 100 | 216.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 142 | 216.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 144 | 216.90 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 16 | NA |
| 145 | 216.90 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 155 | 216.93 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 16 | NA |
| 242 | 217.23 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 11 | NA |
| 268 | 217.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 23 |
| 311 | 217.42 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 326 | 217.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 328 | 217.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 23 |
| 349 | 217.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 350 | 217.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 354 | 217.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 23 |
| 370 | 217.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 381 | 217.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 395 | 217.74 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 401 | 217.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 415 | 217.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 436 | 217.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 440 | 217.87 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 443 | 217.87 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 465 | 217.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 466 | 217.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 468 | 217.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 23 |
| 488 | 218.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 490 | 218.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 503 | 218.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 515 | 218.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 518 | 218.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 539 | 218.15 | precipitation | 0.1 | 43200 | > th | dose independent | no | NA | NA |
| 540 | 218.15 | precipitation | 0.1 | 43200 | < th | dose independent | no | NA | NA |
| 543 | 218.15 | precipitation | 0.1 | 43200 | < th | dose dependent | no | NA | NA |
| 548 | 218.16 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 18 |
| 627 | 218.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 628 | 218.38 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 649 | 218.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 654 | 218.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 697 | 218.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 700 | 218.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 738 | 218.64 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 756 | 218.70 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 2 | NA |
| 763 | 218.72 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 770 | 218.74 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 798 | 218.82 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 800 | 218.83 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 826 | 218.91 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 915 | 219.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |