Os05g0441400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF623, plant domain containing protein.
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Os05g0441400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF623, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.49 | 0.744 | 5.51 | -0.604 | 1.42 | 1.94 | 1.01 | -3.03 | -0.971 | 9.62 | 21.69 | 1404 | -- | -- |
| 258.44 | 0.749 | 5.41 | 0.124 | 1.46 | 2.01 | 0.847 | -- | -0.757 | 9.73 | 19.46 | 1341 | -- | -- |
| 253.61 | 0.742 | 5.54 | -0.749 | 1.41 | 2.02 | -- | -3.78 | -1.02 | 10 | 22.4 | 1348 | -- | -- |
| 261.52 | 0.753 | 5.41 | 0.32 | 1.41 | 1.85 | -- | -- | -0.712 | 9.77 | 20.17 | 1384 | -- | -- |
| 370.61 | 0.897 | 5.56 | -0.702 | -- | 1.9 | -- | -3.32 | -1 | -- | 21.41 | 1484 | -- | -- |
| 361.27 | 0.891 | 5.31 | 0.942 | 1.37 | -- | 1.23 | -- | -0.309 | 9.17 | -- | -- | -- | -- |
| 366.27 | 0.896 | 5.31 | 0.989 | 1.36 | -- | -- | -- | -0.306 | 9.38 | -- | -- | -- | -- |
| 376.47 | 0.904 | 5.44 | 0.329 | -- | 1.73 | -- | -- | -0.716 | -- | 20.39 | 1485 | -- | -- |
| 263.76 | 0.756 | 5.41 | -- | 1.41 | 2 | -- | -- | -0.783 | 9.88 | 19.32 | 1361 | -- | -- |
| 474.01 | 1.02 | 5.35 | 0.981 | -- | -- | -- | -- | -0.301 | -- | -- | -- | -- | -- |
| 392.03 | 0.926 | 5.33 | -- | 1.36 | -- | -- | -- | -0.416 | 9.33 | -- | -- | -- | -- |
| 378.74 | 0.906 | 5.45 | -- | -- | 1.91 | -- | -- | -0.779 | -- | 19.31 | 1489 | -- | -- |
| 499.41 | 1.04 | 5.37 | -- | -- | -- | -- | -- | -0.409 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 249.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 14 | 249.81 | temperature | 20 | 1440 | > th | dose dependent | sin | 21 | NA |
| 17 | 249.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 15 |
| 52 | 250.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 5 |
| 76 | 250.71 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 78 | 250.74 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 99 | 251.08 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 18 |
| 111 | 251.19 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 122 | 251.34 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 130 | 251.42 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 154 | 251.63 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 155 | 251.64 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 170 | 251.75 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 20 |
| 179 | 251.79 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 199 | 251.85 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 22 |
| 207 | 251.90 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 215 | 251.94 | wind | 5 | 43200 | > th | dose dependent | sin | 1 | NA |
| 227 | 251.98 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 230 | 251.99 | wind | 5 | 43200 | > th | dose independent | sin | 1 | NA |
| 264 | 252.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 266 | 252.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 268 | 252.14 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 289 | 252.23 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 343 | 252.43 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 356 | 252.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 373 | 252.54 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 383 | 252.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 18 |
| 388 | 252.62 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |
| 419 | 252.75 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 420 | 252.76 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 22 |
| 465 | 252.89 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 514 | 253.01 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 520 | 253.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 531 | 253.06 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 539 | 253.07 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 657 | 253.37 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 708 | 253.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 759 | 253.59 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 859 | 253.88 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |