Os05g0435700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase).
FiT-DB / Search/ Help/ Sample detail
|
Os05g0435700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.12 | 0.323 | 8.58 | 0.78 | 0.926 | 1.58 | 0.455 | -1.2 | 0.0809 | 19.5 | 10 | 90 | -- | -- |
| 49.25 | 0.327 | 8.56 | 0.946 | 0.913 | 1.58 | 0.428 | -- | 0.125 | 19.6 | 9.597 | 95 | -- | -- |
| 48.67 | 0.325 | 8.58 | 0.766 | 0.923 | 1.62 | -- | -1.18 | 0.0782 | 19.6 | 11.46 | 89 | -- | -- |
| 49.77 | 0.329 | 8.56 | 0.932 | 0.908 | 1.6 | -- | -- | 0.124 | 19.6 | 9.269 | 98 | -- | -- |
| 74.81 | 0.403 | 8.58 | 0.581 | -- | 2.18 | -- | -1.29 | -0.0331 | -- | 5.788 | 373 | -- | -- |
| 73.4 | 0.402 | 8.51 | 1.27 | 1.17 | -- | 0.765 | -- | 0.345 | 18.2 | -- | -- | -- | -- |
| 74.84 | 0.405 | 8.51 | 1.26 | 1.17 | -- | -- | -- | 0.348 | 18.2 | -- | -- | -- | -- |
| 75.67 | 0.405 | 8.56 | 0.777 | -- | 2.16 | -- | -- | 0.0227 | -- | 4.847 | 372 | -- | -- |
| 70.32 | 0.391 | 8.59 | -- | 0.834 | 2.06 | -- | -- | -0.0317 | 20.2 | 10.62 | 116 | -- | -- |
| 145.89 | 0.564 | 8.49 | 1.23 | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
| 116.7 | 0.505 | 8.54 | -- | 1.15 | -- | -- | -- | 0.208 | 18.3 | -- | -- | -- | -- |
| 90.46 | 0.443 | 8.58 | -- | -- | 2.42 | -- | -- | -0.0951 | -- | 7.424 | 378 | -- | -- |
| 185.67 | 0.636 | 8.52 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 6 | 45.26 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 8 | 45.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 11 | 45.51 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 13 | 45.65 | temperature | 30 | 90 | < th | dose dependent | sin | 21 | NA |
| 14 | 45.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 34 | 46.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 45 | 46.81 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 54 | 47.12 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 57 | 47.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 22 |
| 72 | 47.43 | temperature | 15 | 10 | > th | dose dependent | sin | 21 | NA |
| 78 | 47.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 18 |
| 79 | 47.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 87 | 47.57 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 146 | 48.12 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 168 | 48.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 170 | 48.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 172 | 48.26 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 196 | 48.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 219 | 48.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 221 | 48.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 222 | 48.53 | temperature | 15 | 720 | > th | dose dependent | sin | 1 | NA |
| 267 | 48.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 15 |
| 290 | 48.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 299 | 48.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 315 | 48.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 318 | 49.01 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 384 | 49.30 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 400 | 49.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 435 | 49.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 451 | 49.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 509 | 49.58 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 572 | 49.71 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 628 | 49.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 12 |
| 671 | 49.89 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 696 | 49.93 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 730 | 49.98 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 765 | 50.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 772 | 50.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 775 | 50.06 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 904 | 50.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |