Os05g0435100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1218 family protein.
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Os05g0435100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1218 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.66 | 0.577 | 7.15 | 0.771 | 0.373 | 1.61 | 0.675 | -0.114 | -0.165 | 9.14 | 22.1 | 1459 | -- | -- |
| 150.69 | 0.572 | 7.15 | 0.741 | 0.375 | 1.62 | 0.698 | -- | -0.165 | 9.05 | 22.1 | 1450 | -- | -- |
| 152.11 | 0.574 | 7.15 | 0.784 | 0.372 | 1.61 | -- | -0.0779 | -0.167 | 9.64 | 22.1 | 1463 | -- | -- |
| 152.13 | 0.574 | 7.15 | 0.758 | 0.37 | 1.61 | -- | -- | -0.174 | 9.69 | 22.11 | 1463 | -- | -- |
| 153.99 | 0.578 | 7.17 | 0.697 | -- | 1.52 | -- | -0.0547 | -0.184 | -- | 22.28 | 973 | -- | -- |
| 245.01 | 0.734 | 7.27 | 0.147 | 0.39 | -- | 0.488 | -- | -0.705 | 9.88 | -- | -- | -- | -- |
| 245.82 | 0.734 | 7.27 | 0.168 | 0.387 | -- | -- | -- | -0.703 | 10.3 | -- | -- | -- | -- |
| 154 | 0.578 | 7.17 | 0.678 | -- | 1.51 | -- | -- | -0.191 | -- | 22.29 | 973 | -- | -- |
| 164.82 | 0.598 | 7.18 | -- | 0.354 | 1.4 | -- | -- | -0.289 | 9.35 | 22.4 | 1396 | -- | -- |
| 254.94 | 0.746 | 7.28 | 0.162 | -- | -- | -- | -- | -0.704 | -- | -- | -- | -- | -- |
| 246.56 | 0.735 | 7.28 | -- | 0.386 | -- | -- | -- | -0.722 | 10.3 | -- | -- | -- | -- |
| 164.71 | 0.598 | 7.2 | -- | -- | 1.36 | -- | -- | -0.312 | -- | 22.24 | 854 | -- | -- |
| 255.63 | 0.746 | 7.29 | -- | -- | -- | -- | -- | -0.722 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.28 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 154.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 5 | 154.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 14 | 154.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 30 | 155.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 52 | 155.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 53 | 155.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 60 | 155.90 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 87 | 156.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 92 | 156.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 99 | 156.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 227 | 157.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 238 | 157.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 282 | 157.36 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 306 | 157.45 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 355 | 157.77 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 383 | 157.86 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 413 | 157.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 429 | 158.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 472 | 158.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 495 | 158.35 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 498 | 158.35 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 501 | 158.37 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 521 | 158.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 593 | 158.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 595 | 158.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 619 | 158.96 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 668 | 159.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 699 | 159.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 736 | 159.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 791 | 159.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 824 | 159.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 927 | 160.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 936 | 160.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |